Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-362 |
| Cow position: | chr11:21798380-21798763 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 189 |
| Conread position: | 1-381 |
| Cow position: | chr11:50153383-50152987 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 137 |
| Conread position: | 1-383 |
| Cow position: | chr11:62376996-62376604 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 2-264 |
| Cow position: | chr11:62225424-62225693 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 34 |
| Conread position: | 2-305 |
| Cow position: | chr11:7719129-7718805 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 2-373 |
| Cow position: | chr11:17890291-17889902 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 113 |
| Conread position: | 2-377 |
| Cow position: | chr11:26067747-26067352 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 31 |
| Conread position: | 2-377 |
| Cow position: | chr11:64029804-64029429 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 135 |
| Conread position: | 2-377 |
| Cow position: | chr11:66943528-66943131 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 357 |
| Conread position: | 2-381 |
| Cow position: | chr11:63847294-63847681 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 307 |
| Conread position: | 2-382 |
| Cow position: | chr11:4384061-4384457 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 182 |
| Conread position: | 2-383 |
| Cow position: | chr11:1486437-1486033 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 2-383 |
| Cow position: | chr11:38649015-38649412 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 177 |
| Conread position: | 2-383 |
| Cow position: | chr11:58399700-58400097 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 282 |
| Conread position: | 2-383 |
| Cow position: | chr11:68571240-68570839 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 3-328 |
| Cow position: | chr11:44915305-44914957 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 84 |
| Conread position: | 3-377 |
| Cow position: | chr11:68130768-68131163 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 184 |
| Conread position: | 4-381 |
| Cow position: | chr11:44031433-44031831 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 72 |
| Conread position: | 5-381 |
| Cow position: | chr11:74929212-74929611 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 182 |
| Conread position: | 8-381 |
| Cow position: | chr11:61455099-61454703 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 171 |
| Conread position: | 19-375 |
| Cow position: | chr11:40467673-40467298 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 20-215 |
| Cow position: | chr11:39498557-39498754 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 132, 31 |
| Conread position: | 39-381 |
| Cow position: | chr11:17321137-17321489 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 138 |
| Conread position: | 41-377 |
| Cow position: | chr11:19216472-19216119 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 271 |
| Conread position: | 79-375 |
| Cow position: | chr11:76370010-76369693 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 73, 105 |
| Conread position: | 120-361 |
| Cow position: | chr11:53147978-53147729 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 136-383 |
| Cow position: | chr11:17860574-17860320 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 70, 8 |
| Conread position: | 150-381 |
| Cow position: | chr11:78480389-78480629 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 151-377 |
| Cow position: | chr11:15467059-15467297 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 152-377 |
| Cow position: | chr11:68327460-68327223 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 153-383 |
| Cow position: | chr11:7924991-7924756 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 166-383 |
| Cow position: | chr11:27907162-27907386 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 92 |
| Conread position: | 167-349 |
| Cow position: | chr11:21371436-21371247 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 169-381 |
| Cow position: | chr11:23251995-23251772 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.