Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-205 |
| Cow position: | chr12:11558481-11558278 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 151, 85 |
| Conread position: | 1-258 |
| Cow position: | chr12:30687734-30687998 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 173 |
| Conread position: | 1-346 |
| Cow position: | chr12:34673913-34673553 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 178 |
| Conread position: | 1-373 |
| Cow position: | chr12:19868878-19869275 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 72 |
| Conread position: | 2-277 |
| Cow position: | chr12:7065298-7065581 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 202, 124 |
| Conread position: | 2-356 |
| Cow position: | chr12:35311268-35310886 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 2-357 |
| Cow position: | chr12:3038929-3039302 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 84 |
| Conread position: | 2-376 |
| Cow position: | chr12:1006411-1006025 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 2-377 |
| Cow position: | chr12:31742355-31741962 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 183 |
| Conread position: | 2-381 |
| Cow position: | chr12:2242476-2242073 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 101 |
| Conread position: | 2-381 |
| Cow position: | chr12:2285992-2286393 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 171 |
| Conread position: | 3-323 |
| Cow position: | chr12:24440225-24440566 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 181 |
| Conread position: | 4-382 |
| Cow position: | chr12:21497253-21496852 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 140, 16 |
| Conread position: | 13-381 |
| Cow position: | chr12:33297296-33297657 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 19-384 |
| Cow position: | chr12:37770300-37770690 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 165 |
| Conread position: | 37-381 |
| Cow position: | chr12:38678140-38678510 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 75-383 |
| Cow position: | chr12:15078933-15079261 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 77, 109 |
| Conread position: | 77-389 |
| Cow position: | chr12:8487851-8487509 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 187 |
| Conread position: | 97-383 |
| Cow position: | chr12:27993318-27993011 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 101-375 |
| Cow position: | chr12:30605615-30605350 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 198, 51 |
| Conread position: | 106-377 |
| Cow position: | chr12:36501430-36501144 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 108-357 |
| Cow position: | chr12:7977571-7977835 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 153-381 |
| Cow position: | chr12:15089065-15089306 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 162-377 |
| Cow position: | chr12:39176771-39176996 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 162-377 |
| Cow position: | chr12:40158653-40158432 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 162-383 |
| Cow position: | chr12:25878595-25878825 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 164-334 |
| Cow position: | chr12:45802115-45801934 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 168-381 |
| Cow position: | chr12:38774830-38775061 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 169-377 |
| Cow position: | chr12:35718465-35718252 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 44, 137 |
Show alignments to all cow chromosomes.