Cow genome map

Conread name: Pla1-C0000936_N20

Conread position: 1-309
Cow position: chr14:46085331-46085653 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 102

Conread position: 1-376
Cow position: chr14:46178669-46179066 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 1-376
Cow position: chr14:47507687-47507302 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 48

Conread position: 1-377
Cow position: chr14:13723010-13723402 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 47

Conread position: 1-381
Cow position: chr14:20640034-20640431 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 155

Conread position: 2-356
Cow position: chr14:40346585-40346957 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 365

Conread position: 2-377
Cow position: chr14:1727470-1727867 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 183

Conread position: 2-377
Cow position: chr14:12483724-12484106 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-381
Cow position: chr14:16525461-16525071 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 192

Conread position: 2-381
Cow position: chr14:46435235-46435636 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 2-381
Cow position: chr14:46533281-46532868 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 96, 0

Conread position: 2-383
Cow position: chr14:28138151-28137749 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 184

Conread position: 2-383
Cow position: chr14:37883322-37883728 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 184

Conread position: 3-384
Cow position: chr14:22380964-22381365 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 8-383
Cow position: chr14:40230052-40230446 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 105

Conread position: 11-383
Cow position: chr14:7960350-7959956 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 141, 260

Conread position: 25-371
Cow position: chr14:17756124-17755761 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 19

Conread position: 28-381
Cow position: chr14:24894318-24893953 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 30

Conread position: 31-381
Cow position: chr14:35543952-35544322 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 153

Conread position: 32-375
Cow position: chr14:19818938-19818576 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 152

Conread position: 33-383
Cow position: chr14:41749211-41749568 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 191

Conread position: 35-383
Cow position: chr14:35650640-35651015 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 309

Conread position: 40-377
Cow position: chr14:14326552-14326907 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 99

Conread position: 42-377
Cow position: chr14:6599400-6599755 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 61

Conread position: 42-381
Cow position: chr14:49824098-49824434 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 164, 121

Conread position: 48-381
Cow position: chr14:28988237-28987888 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 53-362
Cow position: chr14:46653961-46654286 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 250

Conread position: 66-346
Cow position: chr14:28708556-28708260 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 111

Conread position: 68-381
Cow position: chr14:13360914-13361237 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 101, 84

Conread position: 76-377
Cow position: chr14:44121848-44121542 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 41

Conread position: 110-383
Cow position: chr14:39779231-39778944 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 42, 74

Conread position: 113-388
Cow position: chr14:23645392-23645100 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 149-381
Cow position: chr14:13006939-13006704 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 24

Conread position: 153-377
Cow position: chr14:7647607-7647842 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 20

Conread position: 153-381
Cow position: chr14:19222312-19222075 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 53, 20

Conread position: 153-381
Cow position: chr14:22982319-22982077 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 20

Conread position: 153-381
Cow position: chr14:39807031-39807266 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 20

Conread position: 162-383
Cow position: chr14:45042615-45042384 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 44, 11

Conread position: 165-383
Cow position: chr14:35509555-35509779 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 170

Conread position: 167-380
Cow position: chr14:21285040-21284824 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 39, 0

Conread position: 167-383
Cow position: chr14:34096174-34096404 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 168-339
Cow position: chr14:20300205-20300387 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 168-377
Cow position: chr14:37624071-37624291 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 72

Conread position: 168-381
Cow position: chr14:20009902-20010118 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 17

Conread position: 168-383
Cow position: chr14:10697112-10697335 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 168-383
Cow position: chr14:24683722-24683938 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 136

Conread position: 170-377
Cow position: chr14:22918773-22918553 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 148

Show alignments to all cow chromosomes.