Cow genome map
Conread name: | Pla1-C0000936_N20 |
Conread position: | 1-309 |
Cow position: | chr14:46085331-46085653 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 102 |
Conread position: | 1-376 |
Cow position: | chr14:46178669-46179066 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 0 |
Conread position: | 1-376 |
Cow position: | chr14:47507687-47507302 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 48 |
Conread position: | 1-377 |
Cow position: | chr14:13723010-13723402 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 47 |
Conread position: | 1-381 |
Cow position: | chr14:20640034-20640431 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 155 |
Conread position: | 2-356 |
Cow position: | chr14:40346585-40346957 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 365 |
Conread position: | 2-377 |
Cow position: | chr14:1727470-1727867 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 183 |
Conread position: | 2-377 |
Cow position: | chr14:12483724-12484106 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 101 |
Conread position: | 2-381 |
Cow position: | chr14:16525461-16525071 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 192 |
Conread position: | 2-381 |
Cow position: | chr14:46435235-46435636 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 2-381 |
Cow position: | chr14:46533281-46532868 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 281 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 2-383 |
Cow position: | chr14:28138151-28137749 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 184 |
Conread position: | 2-383 |
Cow position: | chr14:37883322-37883728 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 184 |
Conread position: | 3-384 |
Cow position: | chr14:22380964-22381365 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 48 |
Conread position: | 8-383 |
Cow position: | chr14:40230052-40230446 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 105 |
Conread position: | 11-383 |
Cow position: | chr14:7960350-7959956 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 276 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 141, 260 |
Conread position: | 25-371 |
Cow position: | chr14:17756124-17755761 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 19 |
Conread position: | 28-381 |
Cow position: | chr14:24894318-24893953 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 30 |
Conread position: | 31-381 |
Cow position: | chr14:35543952-35544322 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 153 |
Conread position: | 32-375 |
Cow position: | chr14:19818938-19818576 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 152 |
Conread position: | 33-383 |
Cow position: | chr14:41749211-41749568 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 191 |
Conread position: | 35-383 |
Cow position: | chr14:35650640-35651015 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 309 |
Conread position: | 40-377 |
Cow position: | chr14:14326552-14326907 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 99 |
Conread position: | 42-377 |
Cow position: | chr14:6599400-6599755 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 61 |
Conread position: | 42-381 |
Cow position: | chr14:49824098-49824434 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 247 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 164, 121 |
Conread position: | 48-381 |
Cow position: | chr14:28988237-28987888 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 136 |
Conread position: | 53-362 |
Cow position: | chr14:46653961-46654286 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 225 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 99, 250 |
Conread position: | 66-346 |
Cow position: | chr14:28708556-28708260 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 224 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 86, 111 |
Conread position: | 68-381 |
Cow position: | chr14:13360914-13361237 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 219 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 101, 84 |
Conread position: | 76-377 |
Cow position: | chr14:44121848-44121542 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 205 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 36, 41 |
Conread position: | 110-383 |
Cow position: | chr14:39779231-39778944 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 210 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 42, 74 |
Conread position: | 113-388 |
Cow position: | chr14:23645392-23645100 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 201 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 149-381 |
Cow position: | chr14:13006939-13006704 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 174 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 58, 24 |
Conread position: | 153-377 |
Cow position: | chr14:7647607-7647842 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 164 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 153-381 |
Cow position: | chr14:19222312-19222075 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 153-381 |
Cow position: | chr14:22982319-22982077 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 169 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 54, 20 |
Conread position: | 153-381 |
Cow position: | chr14:39807031-39807266 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 162-383 |
Cow position: | chr14:45042615-45042384 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 168 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 44, 11 |
Conread position: | 165-383 |
Cow position: | chr14:35509555-35509779 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 42, 170 |
Conread position: | 167-380 |
Cow position: | chr14:21285040-21284824 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 166 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 167-383 |
Cow position: | chr14:34096174-34096404 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 168-339 |
Cow position: | chr14:20300205-20300387 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 138 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 168-377 |
Cow position: | chr14:37624071-37624291 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 154 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 39, 72 |
Conread position: | 168-381 |
Cow position: | chr14:20009902-20010118 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 155 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 168-383 |
Cow position: | chr14:10697112-10697335 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 168-383 |
Cow position: | chr14:24683722-24683938 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 164 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 38, 136 |
Conread position: | 170-377 |
Cow position: | chr14:22918773-22918553 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 157 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 36, 148 |
Show alignments to all cow chromosomes.