Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-310 |
| Cow position: | chr15:21910753-21910438 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 176 |
| Conread position: | 1-316 |
| Cow position: | chr15:30985155-30985493 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-381 |
| Cow position: | chr15:10336382-10335998 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 112 |
| Conread position: | 1-381 |
| Cow position: | chr15:10441952-10442354 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 382 |
| Conread position: | 2-275 |
| Cow position: | chr15:38395255-38394968 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 2-282 |
| Cow position: | chr15:6366788-6366494 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 2-301 |
| Cow position: | chr15:27711785-27711469 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 2-353 |
| Cow position: | chr15:31993163-31992793 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 44 |
| Conread position: | 2-354 |
| Cow position: | chr15:13683658-13684018 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 69 |
| Conread position: | 2-366 |
| Cow position: | chr15:22095745-22095375 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 48 |
| Conread position: | 2-371 |
| Cow position: | chr15:37382262-37381880 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 271 |
| Conread position: | 2-375 |
| Cow position: | chr15:21152491-21152097 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-377 |
| Cow position: | chr15:47891982-47892369 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 163 |
| Conread position: | 2-381 |
| Cow position: | chr15:4642529-4642930 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 345 |
| Conread position: | 2-381 |
| Cow position: | chr15:23703405-23703012 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 264 |
| Conread position: | 2-382 |
| Cow position: | chr15:21902805-21903206 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 78 |
| Conread position: | 2-383 |
| Cow position: | chr15:20458663-20459063 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 3-371 |
| Cow position: | chr15:32226253-32226637 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 105 |
| Conread position: | 3-383 |
| Cow position: | chr15:33605564-33605159 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 333 |
| Conread position: | 4-377 |
| Cow position: | chr15:38969768-38969377 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 13-205 |
| Cow position: | chr15:10569989-10570183 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 13-377 |
| Cow position: | chr15:33313817-33314200 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 336 |
| Conread position: | 15-314 |
| Cow position: | chr15:33511470-33511150 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 31-377 |
| Cow position: | chr15:21913756-21913388 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 78, 154 |
| Conread position: | 36-357 |
| Cow position: | chr15:38846692-38846359 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 78 |
| Conread position: | 48-380 |
| Cow position: | chr15:21388579-21388924 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 135 |
| Conread position: | 59-383 |
| Cow position: | chr15:41087282-41087625 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 73-361 |
| Cow position: | chr15:276311-276013 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 111 |
| Conread position: | 74-381 |
| Cow position: | chr15:40797863-40798186 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 101-377 |
| Cow position: | chr15:7264515-7264796 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 105, 52 |
| Conread position: | 121-344 |
| Cow position: | chr15:23531243-23531001 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 149-361 |
| Cow position: | chr15:24037929-24038150 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 149-375 |
| Cow position: | chr15:29542478-29542243 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 154-342 |
| Cow position: | chr15:17477294-17477097 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 166-377 |
| Cow position: | chr15:44829481-44829706 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 167-377 |
| Cow position: | chr15:224978-225199 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 168-340 |
| Cow position: | chr15:10737313-10737495 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 168-380 |
| Cow position: | chr15:26421139-26421356 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 139 |
| Conread position: | 168-381 |
| Cow position: | chr15:20422301-20422519 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 142 |
Show alignments to all cow chromosomes.