Cow genome map
Conread name: | Pla1-C0000936_N20 |
Conread position: | 1-361 |
Cow position: | chr18:30248700-30248330 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 165 |
Conread position: | 1-381 |
Cow position: | chr18:81181-81574 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 119 |
Conread position: | 1-381 |
Cow position: | chr18:7076187-7076582 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 0 |
Conread position: | 2-260 |
Cow position: | chr18:40722088-40722343 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 195 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 204, 101 |
Conread position: | 2-360 |
Cow position: | chr18:39002379-39001998 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 272 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 142, 98 |
Conread position: | 2-377 |
Cow position: | chr18:6047069-6046670 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 182 |
Conread position: | 2-377 |
Cow position: | chr18:8967422-8967812 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 183 |
Conread position: | 2-377 |
Cow position: | chr18:50638044-50637649 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 2-381 |
Cow position: | chr18:47183872-47183466 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 146 |
Conread position: | 2-382 |
Cow position: | chr18:10574471-10574873 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 345 |
Conread position: | 2-383 |
Cow position: | chr18:10655875-10656265 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 3-381 |
Cow position: | chr18:7649413-7649811 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 14 |
Conread position: | 4-361 |
Cow position: | chr18:23659138-23658760 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 29 |
Conread position: | 9-381 |
Cow position: | chr18:4315729-4316124 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 369 |
Conread position: | 10-376 |
Cow position: | chr18:33756316-33756691 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 242 |
Conread position: | 19-383 |
Cow position: | chr18:28767809-28768181 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 90 |
Conread position: | 19-383 |
Cow position: | chr18:40758647-40759035 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 165 |
Conread position: | 30-381 |
Cow position: | chr18:23631132-23630760 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 334 |
Conread position: | 34-375 |
Cow position: | chr18:55590023-55589665 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 79 |
Conread position: | 34-382 |
Cow position: | chr18:19193895-19193533 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 150 |
Conread position: | 43-383 |
Cow position: | chr18:30793919-30794254 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 139 |
Conread position: | 54-291 |
Cow position: | chr18:42480523-42480288 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 174 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 153, 59 |
Conread position: | 60-395 |
Cow position: | chr18:31673032-31672678 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 241 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 49, 247 |
Conread position: | 101-334 |
Cow position: | chr18:5190167-5189910 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 186 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 16, 224 |
Conread position: | 116-377 |
Cow position: | chr18:1023330-1023601 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 184 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 18, 60 |
Conread position: | 146-358 |
Cow position: | chr18:30360550-30360325 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 150-381 |
Cow position: | chr18:34621787-34621549 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 168 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 54, 23 |
Conread position: | 150-383 |
Cow position: | chr18:23766843-23766597 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 183 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 57, 22 |
Conread position: | 153-377 |
Cow position: | chr18:32860229-32860461 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 169 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 58, 13 |
Conread position: | 153-383 |
Cow position: | chr18:26001782-26001545 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 174 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 154-383 |
Cow position: | chr18:44235779-44236020 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 173 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 51, 19 |
Conread position: | 163-383 |
Cow position: | chr18:21195750-21195518 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 169 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 167-357 |
Cow position: | chr18:9010325-9010525 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 147 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 167-377 |
Cow position: | chr18:9029219-9029432 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 38, 59 |
Conread position: | 167-377 |
Cow position: | chr18:20864579-20864797 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 164 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 38, 113 |
Conread position: | 167-383 |
Cow position: | chr18:54656882-54657108 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 159 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 168-377 |
Cow position: | chr18:46108785-46108566 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 162 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 37, 195 |
Conread position: | 168-383 |
Cow position: | chr18:7486846-7487076 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 173 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 168-383 |
Cow position: | chr18:36458528-36458754 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 170-383 |
Cow position: | chr18:21751899-21752123 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 173 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 37, 142 |
Show alignments to all cow chromosomes.