Cow genome map

Conread name: Pla1-C0000936_N20

Conread position: 1-361
Cow position: chr18:30248700-30248330 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 165

Conread position: 1-381
Cow position: chr18:81181-81574 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 119

Conread position: 1-381
Cow position: chr18:7076187-7076582 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 2-260
Cow position: chr18:40722088-40722343 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 204, 101

Conread position: 2-360
Cow position: chr18:39002379-39001998 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 142, 98

Conread position: 2-377
Cow position: chr18:6047069-6046670 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr18:8967422-8967812 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 183

Conread position: 2-377
Cow position: chr18:50638044-50637649 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 2-381
Cow position: chr18:47183872-47183466 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 146

Conread position: 2-382
Cow position: chr18:10574471-10574873 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 345

Conread position: 2-383
Cow position: chr18:10655875-10656265 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 3-381
Cow position: chr18:7649413-7649811 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 14

Conread position: 4-361
Cow position: chr18:23659138-23658760 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 29

Conread position: 9-381
Cow position: chr18:4315729-4316124 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 369

Conread position: 10-376
Cow position: chr18:33756316-33756691 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 242

Conread position: 19-383
Cow position: chr18:28767809-28768181 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 90

Conread position: 19-383
Cow position: chr18:40758647-40759035 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 165

Conread position: 30-381
Cow position: chr18:23631132-23630760 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 334

Conread position: 34-375
Cow position: chr18:55590023-55589665 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 79

Conread position: 34-382
Cow position: chr18:19193895-19193533 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 150

Conread position: 43-383
Cow position: chr18:30793919-30794254 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 139

Conread position: 54-291
Cow position: chr18:42480523-42480288 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 59

Conread position: 60-395
Cow position: chr18:31673032-31672678 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 247

Conread position: 101-334
Cow position: chr18:5190167-5189910 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 224

Conread position: 116-377
Cow position: chr18:1023330-1023601 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 60

Conread position: 146-358
Cow position: chr18:30360550-30360325 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 150-381
Cow position: chr18:34621787-34621549 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 23

Conread position: 150-383
Cow position: chr18:23766843-23766597 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 22

Conread position: 153-377
Cow position: chr18:32860229-32860461 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 13

Conread position: 153-383
Cow position: chr18:26001782-26001545 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 20

Conread position: 154-383
Cow position: chr18:44235779-44236020 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 19

Conread position: 163-383
Cow position: chr18:21195750-21195518 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 167-357
Cow position: chr18:9010325-9010525 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 167-377
Cow position: chr18:9029219-9029432 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 59

Conread position: 167-377
Cow position: chr18:20864579-20864797 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 113

Conread position: 167-383
Cow position: chr18:54656882-54657108 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 168-377
Cow position: chr18:46108785-46108566 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 195

Conread position: 168-383
Cow position: chr18:7486846-7487076 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 168-383
Cow position: chr18:36458528-36458754 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 170-383
Cow position: chr18:21751899-21752123 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 142

Show alignments to all cow chromosomes.