Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-369 |
| Cow position: | chr19:15068550-15068167 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 111 |
| Conread position: | 1-377 |
| Cow position: | chr19:56150606-56150234 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 111, 100 |
| Conread position: | 1-383 |
| Cow position: | chr19:42240851-42240450 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 61 |
| Conread position: | 2-330 |
| Cow position: | chr19:3246595-3246247 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 2-353 |
| Cow position: | chr19:19805085-19804721 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 174 |
| Conread position: | 2-377 |
| Cow position: | chr19:7190165-7189781 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 42 |
| Conread position: | 2-384 |
| Cow position: | chr19:9293697-9294111 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 2-388 |
| Cow position: | chr19:37332964-37333375 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 247 |
| Conread position: | 3-383 |
| Cow position: | chr19:39339096-39338706 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 68 |
| Conread position: | 3-383 |
| Cow position: | chr19:54006355-54006759 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 13-383 |
| Cow position: | chr19:36125050-36125425 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 9 |
| Conread position: | 16-383 |
| Cow position: | chr19:43431864-43431481 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 18-381 |
| Cow position: | chr19:20661960-20661577 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 20-390 |
| Cow position: | chr19:25168831-25168445 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 60 |
| Conread position: | 26-383 |
| Cow position: | chr19:38843081-38842714 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 219 |
| Conread position: | 27-384 |
| Cow position: | chr19:33747317-33747695 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 374 |
| Conread position: | 31-369 |
| Cow position: | chr19:34287280-34287640 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 25 |
| Conread position: | 34-288 |
| Cow position: | chr19:10212853-10213127 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 150 |
| Conread position: | 35-381 |
| Cow position: | chr19:34956224-34955858 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 62-377 |
| Cow position: | chr19:27087305-27087643 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 90, 121 |
| Conread position: | 66-373 |
| Cow position: | chr19:54984579-54984902 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 69-351 |
| Cow position: | chr19:39623283-39622977 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 57, 209 |
| Conread position: | 70-381 |
| Cow position: | chr19:35018738-35018409 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 113 |
| Conread position: | 76-383 |
| Cow position: | chr19:2026618-2026947 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 108-383 |
| Cow position: | chr19:46693695-46693994 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 109-383 |
| Cow position: | chr19:37647293-37646998 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 116-379 |
| Cow position: | chr19:23222197-23222472 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 117-381 |
| Cow position: | chr19:1294751-1295029 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 149-384 |
| Cow position: | chr19:36176337-36176587 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 150-361 |
| Cow position: | chr19:39077926-39078147 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 150-377 |
| Cow position: | chr19:12233750-12233987 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 156-381 |
| Cow position: | chr19:16566763-16566993 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 162-375 |
| Cow position: | chr19:20612144-20612367 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 162-381 |
| Cow position: | chr19:4279377-4279606 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 162-383 |
| Cow position: | chr19:14158554-14158785 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 162-383 |
| Cow position: | chr19:47727958-47727731 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 167-377 |
| Cow position: | chr19:28794035-28793813 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 168-377 |
| Cow position: | chr19:15437724-15437944 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.