Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-361 |
| Cow position: | chr2:55876850-55877227 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 186 |
| Conread position: | 1-375 |
| Cow position: | chr2:59953402-59953012 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 123 |
| Conread position: | 1-383 |
| Cow position: | chr2:33263160-33262768 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 2-361 |
| Cow position: | chr2:34467440-34467061 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 288 |
| Conread position: | 2-375 |
| Cow position: | chr2:37742754-37743145 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 183 |
| Conread position: | 2-377 |
| Cow position: | chr2:12736625-12736235 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 31 |
| Conread position: | 2-380 |
| Cow position: | chr2:23492989-23493383 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 179 |
| Conread position: | 2-381 |
| Cow position: | chr2:27179584-27179977 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-381 |
| Cow position: | chr2:43596721-43596320 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 184 |
| Conread position: | 2-381 |
| Cow position: | chr2:43978448-43978049 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 2-381 |
| Cow position: | chr2:47783825-47784222 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-381 |
| Cow position: | chr2:55632228-55632626 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 31 |
| Conread position: | 2-381 |
| Cow position: | chr2:77468001-77467603 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 89 |
| Conread position: | 2-383 |
| Cow position: | chr2:14883725-14884137 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 2-383 |
| Cow position: | chr2:34642878-34643288 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 2-383 |
| Cow position: | chr2:43826194-43826597 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-389 |
| Cow position: | chr2:12185488-12185885 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 4-373 |
| Cow position: | chr2:16018833-16018441 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 7-279 |
| Cow position: | chr2:24470469-24470194 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 144, 105 |
| Conread position: | 10-371 |
| Cow position: | chr2:28681452-28681064 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 9 |
| Conread position: | 11-377 |
| Cow position: | chr2:21644992-21644606 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 97 |
| Conread position: | 12-384 |
| Cow position: | chr2:39662163-39662552 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 26-379 |
| Cow position: | chr2:59397583-59397209 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 72 |
| Conread position: | 32-381 |
| Cow position: | chr2:42226789-42226420 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 40-379 |
| Cow position: | chr2:1434859-1435188 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 53-282 |
| Cow position: | chr2:62744792-62744544 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 96, 131 |
| Conread position: | 59-346 |
| Cow position: | chr2:30352773-30352475 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 72-361 |
| Cow position: | chr2:45710562-45710867 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 247 |
| Conread position: | 75-379 |
| Cow position: | chr2:5980839-5981161 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 79-383 |
| Cow position: | chr2:35093129-35092836 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 127, 72 |
| Conread position: | 82-381 |
| Cow position: | chr2:6038548-6038855 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 66, 93 |
| Conread position: | 88-355 |
| Cow position: | chr2:47147253-47147536 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 96 |
| Conread position: | 97-381 |
| Cow position: | chr2:57775895-57776199 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 98-381 |
| Cow position: | chr2:39589802-39590100 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 98-381 |
| Cow position: | chr2:39596845-39597143 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 103-381 |
| Cow position: | chr2:42383956-42384253 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 49, 246 |
| Conread position: | 104-383 |
| Cow position: | chr2:58158633-58158926 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 232 |
| Conread position: | 106-373 |
| Cow position: | chr2:40879644-40879931 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 46, 197 |
| Conread position: | 112-383 |
| Cow position: | chr2:38628477-38628760 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 172 |
| Conread position: | 115-382 |
| Cow position: | chr2:35180961-35181248 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 264 |
| Conread position: | 120-375 |
| Cow position: | chr2:31355276-31355548 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 120-377 |
| Cow position: | chr2:41176289-41176566 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 150-371 |
| Cow position: | chr2:45259466-45259236 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 150-375 |
| Cow position: | chr2:22081291-22081526 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 150-377 |
| Cow position: | chr2:24435412-24435179 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 150-377 |
| Cow position: | chr2:41528116-41528352 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 150-382 |
| Cow position: | chr2:56821789-56821546 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 151-357 |
| Cow position: | chr2:58564650-58564436 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 153-377 |
| Cow position: | chr2:30112628-30112859 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 153-383 |
| Cow position: | chr2:13369272-13369515 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 153-383 |
| Cow position: | chr2:42255049-42255286 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 158-353 |
| Cow position: | chr2:33537994-33537793 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 162-371 |
| Cow position: | chr2:69776055-69776267 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 166-283 |
| Cow position: | chr2:62644084-62644208 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 167-381 |
| Cow position: | chr2:40403388-40403175 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 85, 196 |
| Conread position: | 167-383 |
| Cow position: | chr2:56771473-56771696 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 168-383 |
| Cow position: | chr2:23557946-23557722 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 198 |
| Conread position: | 170-388 |
| Cow position: | chr2:47105300-47105073 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 36, 106 |
Show alignments to all cow chromosomes.