Cow genome map


           Conread name:
           Pla1-C0000936_N20
        

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 151
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 187
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 141
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 33
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 9
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               2-282
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               2-282
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               143, 23
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 184
               

               Conread position:
               2-369
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               2-374
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 115
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               281
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               160, 64
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 380
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 31
               

               Conread position:
               2-388
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 252
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 166
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 181
               

               Conread position:
               8-382
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 17
               

               Conread position:
               12-375
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               13-381
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               98, 178
               

               Conread position:
               25-277
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 91
               

               Conread position:
               31-378
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               35, 101
               

               Conread position:
               44-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 337
               

               Conread position:
               51-351
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               52-379
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               100, 7
               

               Conread position:
               53-357
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               65-375
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               66-377
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               86, 309
               

               Conread position:
               72-375
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               88, 274
               

               Conread position:
               83-378
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 167
               

               Conread position:
               85-381
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               86-383
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               97-383
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               98-381
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               54, 86
               

               Conread position:
               100-377
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 198
               

               Conread position:
               105-378
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               147-381
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               149-381
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               149-381
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               150-380
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               150-383
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               150-383
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               51, 130
               

               Conread position:
               153-339
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               153-373
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               153-376
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               153-389
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               154-357
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               167-377
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               39, 161
               

               Conread position:
               168-377
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               38, 197
               

               Conread position:
               169-383
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 187
               
Show alignments to all cow chromosomes.