Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-273 |
| Cow position: | chr22:36594542-36594251 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 123, 77 |
| Conread position: | 1-379 |
| Cow position: | chr22:36583181-36582787 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 54 |
| Conread position: | 1-381 |
| Cow position: | chr22:1310276-1309885 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 79 |
| Conread position: | 1-381 |
| Cow position: | chr22:4120119-4119722 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 128 |
| Conread position: | 1-381 |
| Cow position: | chr22:19828527-19828142 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 33 |
| Conread position: | 1-382 |
| Cow position: | chr22:5041781-5042168 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 70 |
| Conread position: | 2-251 |
| Cow position: | chr22:36564160-36563893 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 107, 183 |
| Conread position: | 2-273 |
| Cow position: | chr22:34605840-34606129 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 150, 34 |
| Conread position: | 2-377 |
| Cow position: | chr22:14816970-14816582 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 2-380 |
| Cow position: | chr22:21502184-21502585 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-381 |
| Cow position: | chr22:6622799-6622399 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 2-382 |
| Cow position: | chr22:5281954-5282356 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 2-382 |
| Cow position: | chr22:33901628-33901228 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 145 |
| Conread position: | 2-383 |
| Cow position: | chr22:865060-864669 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 122 |
| Conread position: | 2-383 |
| Cow position: | chr22:22155049-22155450 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 40 |
| Conread position: | 2-383 |
| Cow position: | chr22:29553503-29553104 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-383 |
| Cow position: | chr22:37829647-37829261 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 101 |
| Conread position: | 2-389 |
| Cow position: | chr22:25659086-25658680 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 62 |
| Conread position: | 3-380 |
| Cow position: | chr22:38439704-38439312 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 181 |
| Conread position: | 4-204 |
| Cow position: | chr22:8505351-8505552 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 4-382 |
| Cow position: | chr22:8481106-8481495 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 8-377 |
| Cow position: | chr22:25206518-25206127 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 61 |
| Conread position: | 11-375 |
| Cow position: | chr22:14925276-14924887 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 185 |
| Conread position: | 17-381 |
| Cow position: | chr22:7912946-7913322 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 223 |
| Conread position: | 42-381 |
| Cow position: | chr22:30689117-30689478 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 143 |
| Conread position: | 43-381 |
| Cow position: | chr22:8357102-8357461 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 141 |
| Conread position: | 53-375 |
| Cow position: | chr22:34735148-34735491 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 131 |
| Conread position: | 60-258 |
| Cow position: | chr22:2523031-2523245 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 60-381 |
| Cow position: | chr22:38949409-38949070 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 116 |
| Conread position: | 75-381 |
| Cow position: | chr22:4535799-4535480 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 87-383 |
| Cow position: | chr22:41136853-41137164 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 82, 162 |
| Conread position: | 92-389 |
| Cow position: | chr22:34476463-34476148 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 103-346 |
| Cow position: | chr22:16292128-16292388 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 49, 148 |
| Conread position: | 103-377 |
| Cow position: | chr22:34611018-34611310 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 238 |
| Conread position: | 106-381 |
| Cow position: | chr22:16236099-16235804 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 113-377 |
| Cow position: | chr22:25764252-25763967 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 123-383 |
| Cow position: | chr22:20626414-20626690 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 163 |
| Conread position: | 149-377 |
| Cow position: | chr22:22054022-22054258 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 150-377 |
| Cow position: | chr22:30583096-30583333 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 150-381 |
| Cow position: | chr22:29290530-29290290 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 150-381 |
| Cow position: | chr22:44717327-44717556 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 151-375 |
| Cow position: | chr22:19592017-19592254 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 152-377 |
| Cow position: | chr22:4017084-4017318 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 153-383 |
| Cow position: | chr22:4161999-4161764 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 154-375 |
| Cow position: | chr22:41045304-41045073 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 154-383 |
| Cow position: | chr22:30710015-30710241 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 154-395 |
| Cow position: | chr22:25361109-25361352 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 166-361 |
| Cow position: | chr22:12572820-12573030 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 167-373 |
| Cow position: | chr22:9734481-9734694 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 167-375 |
| Cow position: | chr22:29881832-29881621 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 180 |
| Conread position: | 167-377 |
| Cow position: | chr22:15337739-15337957 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 167-380 |
| Cow position: | chr22:5090327-5090556 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 204-381 |
| Cow position: | chr22:9977483-9977666 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.