Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-383 |
| Cow position: | chr23:3167704-3168103 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 2-271 |
| Cow position: | chr23:5721534-5721264 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 15 |
| Conread position: | 2-301 |
| Cow position: | chr23:26798232-26797918 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:9874139-9874513 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 39 |
| Conread position: | 2-371 |
| Cow position: | chr23:20980298-20980687 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 259 |
| Conread position: | 2-377 |
| Cow position: | chr23:4608942-4608534 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-383 |
| Cow position: | chr23:2791111-2790711 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-383 |
| Cow position: | chr23:13598806-13599195 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 171 |
| Conread position: | 2-383 |
| Cow position: | chr23:15529249-15529636 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 171 |
| Conread position: | 2-383 |
| Cow position: | chr23:16072680-16073085 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 184 |
| Conread position: | 4-381 |
| Cow position: | chr23:10554557-10554160 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 162 |
| Conread position: | 24-383 |
| Cow position: | chr23:1430326-1429940 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 160 |
| Conread position: | 39-379 |
| Cow position: | chr23:1131592-1131955 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 104, 146 |
| Conread position: | 41-377 |
| Cow position: | chr23:3328420-3328066 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 33, 144 |
| Conread position: | 50-381 |
| Cow position: | chr23:18655386-18655738 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 102, 134 |
| Conread position: | 66-377 |
| Cow position: | chr23:1009882-1009554 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 37 |
| Conread position: | 68-277 |
| Cow position: | chr23:22936026-22936250 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 101, 199 |
| Conread position: | 69-381 |
| Cow position: | chr23:30663105-30662776 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 73-383 |
| Cow position: | chr23:15057104-15056788 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 112 |
| Conread position: | 75-377 |
| Cow position: | chr23:22530875-22530570 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 77-382 |
| Cow position: | chr23:31353874-31354200 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 270 |
| Conread position: | 78-381 |
| Cow position: | chr23:8697974-8698295 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 82-389 |
| Cow position: | chr23:35926130-35926455 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 70, 181 |
| Conread position: | 109-377 |
| Cow position: | chr23:29441442-29441152 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 111-318 |
| Cow position: | chr23:34264952-34264725 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 120-383 |
| Cow position: | chr23:4579468-4579180 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 122-270 |
| Cow position: | chr23:34449795-34449634 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 147-383 |
| Cow position: | chr23:7175231-7175474 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 149-381 |
| Cow position: | chr23:361302-361064 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 203 |
| Conread position: | 149-381 |
| Cow position: | chr23:14739063-14739300 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 150-383 |
| Cow position: | chr23:666497-666256 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 153-369 |
| Cow position: | chr23:14839119-14838896 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 54, 160 |
| Conread position: | 153-383 |
| Cow position: | chr23:24504863-24505099 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 168-381 |
| Cow position: | chr23:25362971-25363196 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 168-383 |
| Cow position: | chr23:30622566-30622340 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 162 |
Show alignments to all cow chromosomes.