Cow genome map
Conread name: | Pla1-C0000936_N20 |
Conread position: | 1-177 |
Cow position: | chr25:34237140-34236965 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1-375 |
Cow position: | chr25:36871305-36871701 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 184 |
Conread position: | 1-383 |
Cow position: | chr25:34659651-34659255 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 101 |
Conread position: | 2-291 |
Cow position: | chr25:9595767-9596070 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 179 |
Conread position: | 2-381 |
Cow position: | chr25:16922342-16921946 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 49 |
Conread position: | 2-383 |
Cow position: | chr25:16136608-16137005 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 23 |
Conread position: | 2-383 |
Cow position: | chr25:18323905-18323503 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 182 |
Conread position: | 4-381 |
Cow position: | chr25:11956284-11956673 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 53 |
Conread position: | 8-346 |
Cow position: | chr25:4522362-4522006 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 69 |
Conread position: | 12-345 |
Cow position: | chr25:21041279-21041633 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 231 |
Conread position: | 16-382 |
Cow position: | chr25:11437342-11436953 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 170 |
Conread position: | 22-375 |
Cow position: | chr25:24572539-24572914 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 54 |
Conread position: | 25-361 |
Cow position: | chr25:6892054-6891691 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 263 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 127, 14 |
Conread position: | 31-383 |
Cow position: | chr25:14954547-14954176 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 152 |
Conread position: | 42-301 |
Cow position: | chr25:34000172-34000448 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 200 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 60, 242 |
Conread position: | 50-381 |
Cow position: | chr25:3992286-3992638 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 134 |
Conread position: | 50-390 |
Cow position: | chr25:26896547-26896897 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 238 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 93, 70 |
Conread position: | 67-382 |
Cow position: | chr25:18294802-18294466 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 239 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 85, 324 |
Conread position: | 75-351 |
Cow position: | chr25:14720012-14720301 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 213 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 85, 47 |
Conread position: | 80-369 |
Cow position: | chr25:14225275-14224960 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 218 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 69, 23 |
Conread position: | 85-383 |
Cow position: | chr25:35339866-35340182 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 229 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 67, 99 |
Conread position: | 97-381 |
Cow position: | chr25:16738398-16738099 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 213 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 55, 87 |
Conread position: | 103-384 |
Cow position: | chr25:20403170-20402869 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 212 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 105-377 |
Cow position: | chr25:41107312-41107599 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 215 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 47, 78 |
Conread position: | 119-383 |
Cow position: | chr25:787838-788115 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 204 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 33, 227 |
Conread position: | 120-371 |
Cow position: | chr25:11830329-11830056 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 135-381 |
Cow position: | chr25:26087103-26087363 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 194 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 17, 102 |
Conread position: | 149-381 |
Cow position: | chr25:7641842-7641606 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 57, 24 |
Conread position: | 150-328 |
Cow position: | chr25:14255169-14255350 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 56, 23 |
Conread position: | 150-354 |
Cow position: | chr25:17191523-17191310 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 161 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 57, 23 |
Conread position: | 150-377 |
Cow position: | chr25:11294400-11294639 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 166 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 57, 23 |
Conread position: | 150-377 |
Cow position: | chr25:24727178-24726943 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 165 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 57, 12 |
Conread position: | 151-390 |
Cow position: | chr25:24136836-24136579 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 173 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 153-357 |
Cow position: | chr25:2414447-2414654 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 153 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 54, 13 |
Conread position: | 153-362 |
Cow position: | chr25:9349648-9349428 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 162 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 153-381 |
Cow position: | chr25:13720930-13720692 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 181 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 154-383 |
Cow position: | chr25:18240764-18241003 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 52, 19 |
Conread position: | 167-377 |
Cow position: | chr25:12176575-12176354 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 167-383 |
Cow position: | chr25:13325225-13325449 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 173 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 35, 119 |
Conread position: | 168-377 |
Cow position: | chr25:23389648-23389440 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 160 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 40, 104 |
Show alignments to all cow chromosomes.