Cow genome map

Conread name: Pla1-C0000936_N20

Conread position: 1-177
Cow position: chr25:34237140-34236965 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-375
Cow position: chr25:36871305-36871701 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 184

Conread position: 1-383
Cow position: chr25:34659651-34659255 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 101

Conread position: 2-291
Cow position: chr25:9595767-9596070 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 179

Conread position: 2-381
Cow position: chr25:16922342-16921946 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 49

Conread position: 2-383
Cow position: chr25:16136608-16137005 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 23

Conread position: 2-383
Cow position: chr25:18323905-18323503 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 4-381
Cow position: chr25:11956284-11956673 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 53

Conread position: 8-346
Cow position: chr25:4522362-4522006 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 69

Conread position: 12-345
Cow position: chr25:21041279-21041633 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 231

Conread position: 16-382
Cow position: chr25:11437342-11436953 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 170

Conread position: 22-375
Cow position: chr25:24572539-24572914 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 54

Conread position: 25-361
Cow position: chr25:6892054-6891691 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 127, 14

Conread position: 31-383
Cow position: chr25:14954547-14954176 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 152

Conread position: 42-301
Cow position: chr25:34000172-34000448 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 60, 242

Conread position: 50-381
Cow position: chr25:3992286-3992638 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 134

Conread position: 50-390
Cow position: chr25:26896547-26896897 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 70

Conread position: 67-382
Cow position: chr25:18294802-18294466 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 85, 324

Conread position: 75-351
Cow position: chr25:14720012-14720301 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 47

Conread position: 80-369
Cow position: chr25:14225275-14224960 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 69, 23

Conread position: 85-383
Cow position: chr25:35339866-35340182 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 99

Conread position: 97-381
Cow position: chr25:16738398-16738099 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 87

Conread position: 103-384
Cow position: chr25:20403170-20402869 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 105-377
Cow position: chr25:41107312-41107599 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 78

Conread position: 119-383
Cow position: chr25:787838-788115 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 33, 227

Conread position: 120-371
Cow position: chr25:11830329-11830056 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 0

Conread position: 135-381
Cow position: chr25:26087103-26087363 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 17, 102

Conread position: 149-381
Cow position: chr25:7641842-7641606 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 24

Conread position: 150-328
Cow position: chr25:14255169-14255350 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 23

Conread position: 150-354
Cow position: chr25:17191523-17191310 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 23

Conread position: 150-377
Cow position: chr25:11294400-11294639 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 23

Conread position: 150-377
Cow position: chr25:24727178-24726943 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 12

Conread position: 151-390
Cow position: chr25:24136836-24136579 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 153-357
Cow position: chr25:2414447-2414654 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 13

Conread position: 153-362
Cow position: chr25:9349648-9349428 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 153-381
Cow position: chr25:13720930-13720692 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 20

Conread position: 154-383
Cow position: chr25:18240764-18241003 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 19

Conread position: 167-377
Cow position: chr25:12176575-12176354 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 167-383
Cow position: chr25:13325225-13325449 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 119

Conread position: 168-377
Cow position: chr25:23389648-23389440 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 104

Show alignments to all cow chromosomes.