Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-375 |
| Cow position: | chr27:6074421-6074031 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 85 |
| Conread position: | 1-381 |
| Cow position: | chr27:17396947-17397340 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 126 |
| Conread position: | 1-383 |
| Cow position: | chr27:23595765-23595377 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 2-376 |
| Cow position: | chr27:15349300-15349692 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 2-377 |
| Cow position: | chr27:2557329-2556921 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 193 |
| Conread position: | 2-381 |
| Cow position: | chr27:24999231-24999628 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 101 |
| Conread position: | 2-382 |
| Cow position: | chr27:26785476-26785872 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 287 |
| Conread position: | 2-383 |
| Cow position: | chr27:7958334-7958729 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 14 |
| Conread position: | 2-383 |
| Cow position: | chr27:11434827-11435220 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 2-383 |
| Cow position: | chr27:12751194-12751580 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 286 |
| Conread position: | 2-383 |
| Cow position: | chr27:15643951-15644353 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-383 |
| Cow position: | chr27:28984431-28984837 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 185 |
| Conread position: | 2-384 |
| Cow position: | chr27:3989115-3988713 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 181 |
| Conread position: | 2-384 |
| Cow position: | chr27:22549284-22549677 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 3-377 |
| Cow position: | chr27:815870-815480 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 181 |
| Conread position: | 4-369 |
| Cow position: | chr27:20065858-20066243 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 40, 317 |
| Conread position: | 19-381 |
| Cow position: | chr27:23511608-23511228 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 31-377 |
| Cow position: | chr27:4673492-4673131 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 238 |
| Conread position: | 68-377 |
| Cow position: | chr27:2298853-2298522 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 77-377 |
| Cow position: | chr27:13273580-13273896 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 92-377 |
| Cow position: | chr27:21977722-21978028 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 5 |
| Conread position: | 113-301 |
| Cow position: | chr27:21297296-21297087 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 142-362 |
| Cow position: | chr27:22603518-22603288 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 149-381 |
| Cow position: | chr27:26427780-26428022 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 150-315 |
| Cow position: | chr27:23148181-23148355 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 150-383 |
| Cow position: | chr27:24227446-24227689 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 154-375 |
| Cow position: | chr27:20641000-20641231 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 167-375 |
| Cow position: | chr27:8629543-8629759 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 168 |
| Conread position: | 167-375 |
| Cow position: | chr27:25411184-25411407 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 167-396 |
| Cow position: | chr27:26999094-26999332 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 168-376 |
| Cow position: | chr27:26397940-26398147 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 65 |
Show alignments to all cow chromosomes.