Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-205 |
| Cow position: | chr28:6060323-6060117 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 108, 45 |
| Conread position: | 1-352 |
| Cow position: | chr28:30327626-30327255 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 118 |
| Conread position: | 1-377 |
| Cow position: | chr28:8371937-8372322 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 119 |
| Conread position: | 1-383 |
| Cow position: | chr28:21844412-21844813 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 112 |
| Conread position: | 1-383 |
| Cow position: | chr28:25056424-25056830 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 184 |
| Conread position: | 2-354 |
| Cow position: | chr28:10900277-10900649 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-381 |
| Cow position: | chr28:10295644-10296045 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-383 |
| Cow position: | chr28:5941198-5941600 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 2-383 |
| Cow position: | chr28:14234450-14234830 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 21 |
| Conread position: | 2-383 |
| Cow position: | chr28:15272800-15272403 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 50 |
| Conread position: | 3-377 |
| Cow position: | chr28:9285907-9285526 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 182 |
| Conread position: | 8-382 |
| Cow position: | chr28:11452013-11451611 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 393 |
| Conread position: | 26-383 |
| Cow position: | chr28:16925741-16925353 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 7 |
| Conread position: | 46-377 |
| Cow position: | chr28:19515876-19515540 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 57 |
| Conread position: | 50-392 |
| Cow position: | chr28:11427031-11426682 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 53 |
| Conread position: | 53-381 |
| Cow position: | chr28:23254280-23253945 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 131 |
| Conread position: | 54-381 |
| Cow position: | chr28:11585699-11585353 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 61-381 |
| Cow position: | chr28:3256318-3256649 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 104-377 |
| Cow position: | chr28:4058286-4058576 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 149-345 |
| Cow position: | chr28:5904349-5904555 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 149-362 |
| Cow position: | chr28:33031845-33032068 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 149-381 |
| Cow position: | chr28:14997678-14997917 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 149-383 |
| Cow position: | chr28:3479879-3480127 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 150-343 |
| Cow position: | chr28:22329930-22330128 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 150-377 |
| Cow position: | chr28:24606197-24605963 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 190 |
| Conread position: | 166-381 |
| Cow position: | chr28:22332180-22332399 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 167-388 |
| Cow position: | chr28:12946576-12946800 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 173-371 |
| Cow position: | chr28:10616313-10616106 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.