Cow genome map


           Conread name:
           Pla1-C0000936_N20
        

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               151, 101
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 176
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 274
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 183
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 184
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               120, 125
               

               Conread position:
               2-275
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               139, 101
               

               Conread position:
               2-317
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               2-339
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               150, 23
               

               Conread position:
               2-356
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 212
               

               Conread position:
               2-357
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               2-361
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               204, 108
               

               Conread position:
               2-371
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 101
               

               Conread position:
               2-376
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 56
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 236
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 181
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 174
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 62
               

               Conread position:
               2-390
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               8-372
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 105
               

               Conread position:
               11-381
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 102
               

               Conread position:
               11-381
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 273
               

               Conread position:
               11-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 35
               

               Conread position:
               25-377
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               112, 78
               

               Conread position:
               25-383
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 160
               

               Conread position:
               41-381
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               62-377
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               64-373
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 119
               

               Conread position:
               69-381
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               85-375
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 91
               

               Conread position:
               103-357
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               103-375
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               119-373
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 55
               

               Conread position:
               146-356
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               61, 6
               

               Conread position:
               149-357
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               149-369
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               58, 160
               

               Conread position:
               149-381
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               150-361
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               153-340
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               153-381
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               166-339
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               166-383
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 171
               

               Conread position:
               166-383
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               167-376
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               88, 173
               

               Conread position:
               168-383
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 144
               

               Conread position:
               202-381
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.