Cow genome map
| Conread name: | Pla1-C0000936_N20 |
| Conread position: | 1-361 |
| Cow position: | chr8:16938990-16938608 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 183 |
| Conread position: | 1-377 |
| Cow position: | chr8:19996262-19995874 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 281 |
| Conread position: | 1-377 |
| Cow position: | chr8:48099684-48099288 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 183 |
| Conread position: | 1-381 |
| Cow position: | chr8:833836-834227 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 10 |
| Conread position: | 1-381 |
| Cow position: | chr8:19998623-19998223 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 182 |
| Conread position: | 1-381 |
| Cow position: | chr8:54051774-54052166 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 95 |
| Conread position: | 1-383 |
| Cow position: | chr8:18057196-18057600 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 150 |
| Conread position: | 1-383 |
| Cow position: | chr8:33814401-33814806 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 184 |
| Conread position: | 1-383 |
| Cow position: | chr8:33993629-33994025 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 302 |
| Conread position: | 2-205 |
| Cow position: | chr8:26386836-26386625 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-258 |
| Cow position: | chr8:42009875-42010140 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 125, 15 |
| Conread position: | 2-355 |
| Cow position: | chr8:1115329-1114957 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 117 |
| Conread position: | 2-361 |
| Cow position: | chr8:3446614-3446243 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 171 |
| Conread position: | 2-363 |
| Cow position: | chr8:17489101-17488733 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 2-371 |
| Cow position: | chr8:16195034-16195418 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 176 |
| Conread position: | 2-371 |
| Cow position: | chr8:36560600-36560220 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 155, 87 |
| Conread position: | 2-375 |
| Cow position: | chr8:27152517-27152130 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 45 |
| Conread position: | 2-377 |
| Cow position: | chr8:26607394-26607791 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 337 |
| Conread position: | 2-377 |
| Cow position: | chr8:33437147-33437499 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 201, 76 |
| Conread position: | 2-377 |
| Cow position: | chr8:47752455-47752062 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 101 |
| Conread position: | 2-377 |
| Cow position: | chr8:55122991-55122597 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-381 |
| Cow position: | chr8:13374004-13374404 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-381 |
| Cow position: | chr8:15569972-15569600 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 88 |
| Conread position: | 2-381 |
| Cow position: | chr8:19600933-19601343 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 112, 194 |
| Conread position: | 2-381 |
| Cow position: | chr8:35211702-35211294 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 339 |
| Conread position: | 2-383 |
| Cow position: | chr8:2166316-2165914 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 182 |
| Conread position: | 2-383 |
| Cow position: | chr8:51602969-51602573 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 150, 34 |
| Conread position: | 2-384 |
| Cow position: | chr8:40888735-40888335 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 185 |
| Conread position: | 5-361 |
| Cow position: | chr8:45878514-45878885 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 5-361 |
| Cow position: | chr8:45925095-45925467 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 114 |
| Conread position: | 8-383 |
| Cow position: | chr8:59277766-59277370 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 11-349 |
| Cow position: | chr8:43439059-43439415 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 336 |
| Conread position: | 11-355 |
| Cow position: | chr8:35924216-35923886 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 141, 201 |
| Conread position: | 11-381 |
| Cow position: | chr8:24372240-24371859 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 173 |
| Conread position: | 13-381 |
| Cow position: | chr8:36648976-36648600 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 299 |
| Conread position: | 19-343 |
| Cow position: | chr8:9985073-9985417 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 67 |
| Conread position: | 28-374 |
| Cow position: | chr8:60989126-60989499 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 58, 178 |
| Conread position: | 31-205 |
| Cow position: | chr8:42890067-42889896 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 38-376 |
| Cow position: | chr8:23677295-23677633 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 77, 136 |
| Conread position: | 39-383 |
| Cow position: | chr8:41263817-41264169 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 69, 248 |
| Conread position: | 54-377 |
| Cow position: | chr8:53430753-53431100 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 302 |
| Conread position: | 59-334 |
| Cow position: | chr8:49287981-49287690 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 73-373 |
| Cow position: | chr8:26650838-26651156 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 77, 113 |
| Conread position: | 74-383 |
| Cow position: | chr8:39065757-39066075 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 75-377 |
| Cow position: | chr8:31958170-31958484 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 82-381 |
| Cow position: | chr8:36375959-36375652 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 94-342 |
| Cow position: | chr8:29947982-29947725 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 103-383 |
| Cow position: | chr8:25082047-25082343 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 105-377 |
| Cow position: | chr8:48211628-48211335 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 275 |
| Conread position: | 111-377 |
| Cow position: | chr8:5449287-5449020 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 115-383 |
| Cow position: | chr8:45245439-45245156 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 150-375 |
| Cow position: | chr8:53429397-53429627 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 150-381 |
| Cow position: | chr8:10399933-10400168 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 151-381 |
| Cow position: | chr8:2580039-2579797 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 53, 228 |
| Conread position: | 151-381 |
| Cow position: | chr8:23179922-23179687 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 152-383 |
| Cow position: | chr8:35436992-35436752 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 153-370 |
| Cow position: | chr8:8134890-8134658 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 153-371 |
| Cow position: | chr8:39808187-39808410 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 153-383 |
| Cow position: | chr8:39144393-39144626 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 154-377 |
| Cow position: | chr8:16972906-16972675 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 163-381 |
| Cow position: | chr8:27955801-27955580 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 166-355 |
| Cow position: | chr8:46615757-46615954 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 167-377 |
| Cow position: | chr8:36679391-36679170 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 168-377 |
| Cow position: | chr8:3150069-3149846 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 190 |
| Conread position: | 168-383 |
| Cow position: | chr8:6233261-6233035 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 214-381 |
| Cow position: | chr8:10176459-10176284 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.