Cow genome map


           Conread name:
           Pla1-C0000936_N20
        

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 183
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 281
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 183
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 10
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 182
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 95
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 150
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 184
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 302
               

               Conread position:
               2-205
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 117
               

               Conread position:
               2-361
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 171
               

               Conread position:
               2-363
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               2-371
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 176
               

               Conread position:
               2-371
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               155, 87
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 45
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 337
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               201, 76
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 101
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 88
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 194
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 339
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               278
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 185
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 31
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 114
               

               Conread position:
               8-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               11-349
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 336
               

               Conread position:
               11-355
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 201
               

               Conread position:
               11-381
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 173
               

               Conread position:
               13-381
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 299
               

               Conread position:
               19-343
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               28-374
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               58, 178
               

               Conread position:
               31-205
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               38-376
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               77, 136
               

               Conread position:
               39-383
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               69, 248
               

               Conread position:
               54-377
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               44, 302
               

               Conread position:
               59-334
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               73-373
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               77, 113
               

               Conread position:
               74-383
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               57, 65
               

               Conread position:
               75-377
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               82-381
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               94-342
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               103-383
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               105-377
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 275
               

               Conread position:
               111-377
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               103, 41
               

               Conread position:
               115-383
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               150-375
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               150-381
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               151-381
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 228
               

               Conread position:
               151-381
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               152-383
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               153-370
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               153-371
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               153-383
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               154-377
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               163-381
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               166-355
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               167-377
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               168-377
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               37, 190
               

               Conread position:
               168-383
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               214-381
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               
Show alignments to all cow chromosomes.