Cow genome map


           Conread name:
           Pla1-C0001063_I16
        

               Conread position:
               48-446
               

               Cow position:
               chr11:73462423-73462821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               84-500
               

               Cow position:
               chr11:45921779-45922203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               41, 9
               

               Conread position:
               86-335
               

               Cow position:
               chr11:29061380-29061627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               86-420
               

               Cow position:
               chr11:80473442-80473782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               90-237
               

               Cow position:
               chr11:52314720-52314867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 103
               

               Conread position:
               93-479
               

               Cow position:
               chr11:38834613-38835007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 334
               

               Conread position:
               93-501
               

               Cow position:
               chr11:28053793-28054203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               95-361
               

               Cow position:
               chr11:65980137-65980412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               95-410
               

               Cow position:
               chr11:27374676-27374362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               95-433
               

               Cow position:
               chr11:54995017-54995359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               108-499
               

               Cow position:
               chr11:9302967-9303349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               110-335
               

               Cow position:
               chr11:34454695-34454460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               15, 144
               
Show alignments to all cow chromosomes.