Cow genome map


           Conread name:
           Pla1-C0001063_I16
        

               Conread position:
               28-383
               

               Cow position:
               chr20:1743086-1742728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               86-472
               

               Cow position:
               chr20:19884645-19884268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               86-500
               

               Cow position:
               chr20:2399807-2399388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               90-499
               

               Cow position:
               chr20:19050377-19050783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 7
               

               Conread position:
               93-308
               

               Cow position:
               chr20:27896880-27897099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               93-501
               

               Cow position:
               chr20:39718284-39717875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               94-500
               

               Cow position:
               chr20:7089990-7090404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 256
               

               Conread position:
               96-500
               

               Cow position:
               chr20:18962673-18963061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               86, 122
               

               Conread position:
               130-505
               

               Cow position:
               chr20:13792452-13792088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               10, 131
               
Show alignments to all cow chromosomes.