Cow genome map


           Conread name:
           Pla1-C0001063_I16
        

               Conread position:
               54-267
               

               Cow position:
               chr21:21138804-21138585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               93-322
               

               Cow position:
               chr21:30598199-30598428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               93-415
               

               Cow position:
               chr21:5018397-5018064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 240
               

               Conread position:
               93-501
               

               Cow position:
               chr21:2882454-2882872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               274
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               33, 339
               

               Conread position:
               93-501
               

               Cow position:
               chr21:5839982-5840398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 337
               

               Conread position:
               96-325
               

               Cow position:
               chr21:45786152-45786389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               96-479
               

               Cow position:
               chr21:218305-217942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               96-503
               

               Cow position:
               chr21:45301198-45301612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               122-482
               

               Cow position:
               chr21:45977206-45977575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               186-403
               

               Cow position:
               chr21:28613277-28613058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 153
               
Show alignments to all cow chromosomes.