Cow genome map
| Conread name: | Pla1-C0001063_I16 |
| Conread position: | 46-450 |
| Cow position: | chrX:1391903-1391490 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 85-500 |
| Cow position: | chrX:18842046-18842462 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 82, 210 |
| Conread position: | 86-503 |
| Cow position: | chrX:27120880-27121302 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 89-476 |
| Cow position: | chrX:6198190-6198586 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 210 |
| Conread position: | 90-338 |
| Cow position: | chrX:27006413-27006153 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 181 |
| Conread position: | 90-339 |
| Cow position: | chrX:18900183-18900435 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 92-368 |
| Cow position: | chrX:33707351-33707066 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 202 |
| Conread position: | 93-313 |
| Cow position: | chrX:21275996-21276222 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 93-322 |
| Cow position: | chrX:15118154-15118380 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 93-420 |
| Cow position: | chrX:23455102-23455438 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 93-500 |
| Cow position: | chrX:23213431-23213847 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 253 |
| Conread position: | 93-501 |
| Cow position: | chrX:2481716-2482131 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 86, 336 |
| Conread position: | 93-501 |
| Cow position: | chrX:29852649-29853066 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 94-480 |
| Cow position: | chrX:29996288-29996677 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 95-338 |
| Cow position: | chrX:18242082-18241842 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 95-384 |
| Cow position: | chrX:4411561-4411279 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 259, 92 |
| Conread position: | 95-501 |
| Cow position: | chrX:27344549-27344942 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 97-478 |
| Cow position: | chrX:18553341-18552952 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 245 |
| Conread position: | 103-476 |
| Cow position: | chrX:29120337-29119964 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 109-486 |
| Cow position: | chrX:27390289-27390668 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 58 |
| Conread position: | 114-376 |
| Cow position: | chrX:39763496-39763222 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 114-486 |
| Cow position: | chrX:17491073-17491449 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 130 |
| Conread position: | 130-485 |
| Cow position: | chrX:19468896-19468540 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 55, 240 |
| Conread position: | 200-505 |
| Cow position: | chrX:2641976-2641688 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 143, 55 |
Show alignments to all cow chromosomes.