Cow genome map
| Conread name: | Spl1-SPL010020G03 |
| Conread position: | 1-435 |
| Cow position: | chr11:15653247-15653680 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 62 |
| Conread position: | 3-216 |
| Cow position: | chr11:61297532-61297325 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 3-223 |
| Cow position: | chr11:42366055-42366288 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 3-296 |
| Cow position: | chr11:54650107-54649827 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 290, 50 |
| Conread position: | 3-315 |
| Cow position: | chr11:39484041-39484343 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 169, 57 |
| Conread position: | 3-362 |
| Cow position: | chr11:9897185-9897525 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-378 |
| Cow position: | chr11:8819969-8820337 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 170, 64 |
| Conread position: | 3-385 |
| Cow position: | chr11:81067508-81067884 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 169, 62 |
| Conread position: | 3-386 |
| Cow position: | chr11:40231236-40230860 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 3-393 |
| Cow position: | chr11:56417311-56416935 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 3-397 |
| Cow position: | chr11:11174090-11174487 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 132, 65 |
| Conread position: | 3-409 |
| Cow position: | chr11:51034048-51034445 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 126, 62 |
| Conread position: | 3-409 |
| Cow position: | chr11:84966873-84967277 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 3-415 |
| Cow position: | chr11:28786584-28786994 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 132, 43 |
| Conread position: | 3-415 |
| Cow position: | chr11:53308137-53307728 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 123, 65 |
| Conread position: | 3-424 |
| Cow position: | chr11:26655373-26655779 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 152 |
| Conread position: | 3-440 |
| Cow position: | chr11:33601869-33601438 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 3-440 |
| Cow position: | chr11:40403000-40402573 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 63, 147 |
| Conread position: | 3-440 |
| Cow position: | chr11:49485628-49486064 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 3-441 |
| Cow position: | chr11:44233193-44233619 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 62 |
| Conread position: | 3-458 |
| Cow position: | chr11:73039339-73039758 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 281, 35 |
| Conread position: | 3-465 |
| Cow position: | chr11:40773294-40772850 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 3-465 |
| Cow position: | chr11:65281778-65282230 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 239, 62 |
| Conread position: | 3-466 |
| Cow position: | chr11:67920573-67920121 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 3-468 |
| Cow position: | chr11:69168008-69168485 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 3-472 |
| Cow position: | chr11:10850880-10851338 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 83, 60 |
| Conread position: | 4-244 |
| Cow position: | chr11:21879030-21878787 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 4-424 |
| Cow position: | chr11:2951327-2950916 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 122, 60 |
| Conread position: | 4-428 |
| Cow position: | chr11:27889593-27889990 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 5 |
| Conread position: | 4-462 |
| Cow position: | chr11:15942551-15942106 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 95, 59 |
| Conread position: | 18-325 |
| Cow position: | chr11:42229340-42229649 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 105-382 |
| Cow position: | chr11:42517208-42517480 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 70 |
Show alignments to all cow chromosomes.