Cow genome map


           Conread name:
           Spl1-SPL010020G03
        

               Conread position:
               3-176
               

               Cow position:
               chr20:5538294-5538466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               112, 62
               

               Conread position:
               3-394
               

               Cow position:
               chr20:30461917-30462303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               3-399
               

               Cow position:
               chr20:34231744-34231358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               3-440
               

               Cow position:
               chr20:9339136-9339567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               86, 62
               

               Conread position:
               3-440
               

               Cow position:
               chr20:28560772-28560340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               170, 57
               

               Conread position:
               3-443
               

               Cow position:
               chr20:28724868-28725316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               3-465
               

               Cow position:
               chr20:25331040-25330591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               306
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               4-397
               

               Cow position:
               chr20:20364629-20364235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               12-454
               

               Cow position:
               chr20:33295828-33295385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               83-431
               

               Cow position:
               chr20:42931041-42931393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 82
               
Show alignments to all cow chromosomes.