Cow genome map
| Conread name: | Spl1-SPL010020G03 |
| Conread position: | 2-406 |
| Cow position: | chr21:33948541-33948937 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 64, 100 |
| Conread position: | 2-456 |
| Cow position: | chr21:46291602-46292055 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 2-462 |
| Cow position: | chr21:4191516-4191974 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 3-238 |
| Cow position: | chr21:15247576-15247345 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 156, 34 |
| Conread position: | 3-258 |
| Cow position: | chr21:12099755-12100017 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 146, 60 |
| Conread position: | 3-292 |
| Cow position: | chr21:20773064-20773355 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 140, 60 |
| Conread position: | 3-317 |
| Cow position: | chr21:30161989-30161691 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 3-361 |
| Cow position: | chr21:46357513-46357160 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 3-390 |
| Cow position: | chr21:44262428-44262801 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 3-425 |
| Cow position: | chr21:13274814-13275244 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 287 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 88, 55 |
| Conread position: | 3-440 |
| Cow position: | chr21:30312926-30313353 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 153, 57 |
| Conread position: | 4-366 |
| Cow position: | chr21:21478803-21478445 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 127, 54 |
| Conread position: | 5-377 |
| Cow position: | chr21:48895715-48896077 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 151, 57 |
| Conread position: | 19-394 |
| Cow position: | chr21:49647728-49647354 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 19-415 |
| Cow position: | chr21:25814157-25813777 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 45 |
| Conread position: | 19-427 |
| Cow position: | chr21:35947625-35947212 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 20-426 |
| Cow position: | chr21:25290920-25291324 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 28-341 |
| Cow position: | chr21:37353387-37353094 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 29-399 |
| Cow position: | chr21:3479663-3480037 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 158 |
| Conread position: | 65-440 |
| Cow position: | chr21:21020607-21020980 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 82, 62 |
Show alignments to all cow chromosomes.