Cow genome map
| Conread name: | Spl1-SPL010020G03 |
| Conread position: | 1-391 |
| Cow position: | chr3:79316223-79316615 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 2-465 |
| Cow position: | chr3:27223021-27223470 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 58 |
| Conread position: | 2-465 |
| Cow position: | chr3:37015209-37015662 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 246 |
| Conread position: | 3-299 |
| Cow position: | chr3:14881551-14881254 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 111, 60 |
| Conread position: | 3-327 |
| Cow position: | chr3:56023363-56023684 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 55 |
| Conread position: | 3-357 |
| Cow position: | chr3:58026037-58025677 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 3-379 |
| Cow position: | chr3:10038172-10038553 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 128, 48 |
| Conread position: | 3-385 |
| Cow position: | chr3:42977610-42977233 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 3-397 |
| Cow position: | chr3:39233562-39233961 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 3-406 |
| Cow position: | chr3:10855330-10854942 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 121, 52 |
| Conread position: | 3-409 |
| Cow position: | chr3:83767227-83767629 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 3-413 |
| Cow position: | chr3:57977574-57977160 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 152, 69 |
| Conread position: | 3-415 |
| Cow position: | chr3:23010346-23010745 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 3-440 |
| Cow position: | chr3:322878-322449 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 50 |
| Conread position: | 3-440 |
| Cow position: | chr3:35619531-35619968 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 277 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 170, 62 |
| Conread position: | 3-440 |
| Cow position: | chr3:49542227-49541792 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 175, 62 |
| Conread position: | 3-440 |
| Cow position: | chr3:72864067-72863633 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 60 |
| Conread position: | 3-441 |
| Cow position: | chr3:24443121-24442686 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 84, 62 |
| Conread position: | 3-453 |
| Cow position: | chr3:45615314-45615754 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 150, 62 |
| Conread position: | 3-465 |
| Cow position: | chr3:2707895-2707440 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 295 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 170, 62 |
| Conread position: | 3-465 |
| Cow position: | chr3:23204700-23204242 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 4-465 |
| Cow position: | chr3:40101875-40101425 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 170, 12 |
| Conread position: | 5-338 |
| Cow position: | chr3:24456039-24455717 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 144, 50 |
| Conread position: | 6-364 |
| Cow position: | chr3:27515253-27515611 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 54 |
| Conread position: | 7-399 |
| Cow position: | chr3:226899-226517 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 89-429 |
| Cow position: | chr3:49165352-49165008 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 42 |
Show alignments to all cow chromosomes.