Cow genome map
| Conread name: | Spl1-SPL010020G03 |
| Conread position: | 3-154 |
| Cow position: | chr5:26404036-26403888 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 3-215 |
| Cow position: | chr5:21920948-21921169 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 60 |
| Conread position: | 3-285 |
| Cow position: | chr5:4042314-4042040 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 136, 60 |
| Conread position: | 3-317 |
| Cow position: | chr5:62759258-62758944 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 3-400 |
| Cow position: | chr5:68337618-68337239 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 3-415 |
| Cow position: | chr5:26058010-26058415 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 128, 60 |
| Conread position: | 3-439 |
| Cow position: | chr5:72299390-72298951 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 60 |
| Conread position: | 3-440 |
| Cow position: | chr5:25912612-25913039 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 175, 52 |
| Conread position: | 3-465 |
| Cow position: | chr5:22857755-22857293 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 237 |
| Conread position: | 3-465 |
| Cow position: | chr5:23829296-23828857 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 149, 64 |
| Conread position: | 3-466 |
| Cow position: | chr5:4963501-4963045 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 138, 62 |
| Conread position: | 3-503 |
| Cow position: | chr5:3809359-3809871 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 340 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 60 |
| Conread position: | 4-394 |
| Cow position: | chr5:2959154-2959535 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 4-442 |
| Cow position: | chr5:40791721-40792151 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 116, 6 |
| Conread position: | 13-418 |
| Cow position: | chr5:57363892-57363500 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 14-463 |
| Cow position: | chr5:29674112-29674547 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 100, 51 |
| Conread position: | 20-413 |
| Cow position: | chr5:54658718-54658340 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 138, 43 |
| Conread position: | 188-434 |
| Cow position: | chr5:27100296-27100537 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 10 |
Show alignments to all cow chromosomes.