Cow genome map
| Conread name: | Spl1-SPL010020G03 |
| Conread position: | 2-397 |
| Cow position: | chr6:63598703-63599065 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-462 |
| Cow position: | chr6:34273847-34273389 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 146, 32 |
| Conread position: | 2-462 |
| Cow position: | chr6:68826834-68826386 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 58 |
| Conread position: | 3-238 |
| Cow position: | chr6:31624833-31625069 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 3-326 |
| Cow position: | chr6:58016374-58016694 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 122, 62 |
| Conread position: | 3-362 |
| Cow position: | chr6:51868013-51868368 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 62 |
| Conread position: | 3-377 |
| Cow position: | chr6:6121340-6120987 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 3-425 |
| Cow position: | chr6:19441224-19441648 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 3-441 |
| Cow position: | chr6:27341619-27342056 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 143, 60 |
| Conread position: | 3-460 |
| Cow position: | chr6:47154431-47154867 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 168, 62 |
| Conread position: | 3-464 |
| Cow position: | chr6:53773069-53773539 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 46, 198 |
| Conread position: | 3-465 |
| Cow position: | chr6:6182690-6182247 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 170, 62 |
| Conread position: | 3-465 |
| Cow position: | chr6:28102847-28102394 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 139, 57 |
| Conread position: | 3-515 |
| Cow position: | chr6:50485755-50485250 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 4-418 |
| Cow position: | chr6:14144051-14144457 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 4-425 |
| Cow position: | chr6:7161795-7162200 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 319, 56 |
| Conread position: | 4-465 |
| Cow position: | chr6:53672357-53672817 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 14-440 |
| Cow position: | chr6:60876331-60876756 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 287 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 20-215 |
| Cow position: | chr6:63771053-63770853 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 133, 43 |
| Conread position: | 38-419 |
| Cow position: | chr6:16605011-16605396 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 212 |
| Conread position: | 46-461 |
| Cow position: | chr6:35724445-35724859 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 79-327 |
| Cow position: | chr6:31226561-31226804 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 99-465 |
| Cow position: | chr6:65011281-65011642 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 48, 146 |
Show alignments to all cow chromosomes.