Cow genome map
| Conread name: | Spl1-SPL010020G03 |
| Conread position: | 1-465 |
| Cow position: | chr9:52037320-52037766 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 3-258 |
| Cow position: | chr9:20421055-20420800 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 3-332 |
| Cow position: | chr9:37015092-37014773 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 209, 55 |
| Conread position: | 3-377 |
| Cow position: | chr9:2102589-2102964 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 3-440 |
| Cow position: | chr9:1998348-1997914 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 113, 62 |
| Conread position: | 3-440 |
| Cow position: | chr9:6252515-6252953 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 144, 62 |
| Conread position: | 3-440 |
| Cow position: | chr9:12161555-12161985 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 136, 61 |
| Conread position: | 3-463 |
| Cow position: | chr9:10678978-10678527 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 299 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 3-465 |
| Cow position: | chr9:17303026-17302572 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 144, 62 |
| Conread position: | 3-465 |
| Cow position: | chr9:21412259-21412711 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 87, 62 |
| Conread position: | 3-465 |
| Cow position: | chr9:21461423-21461866 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 129, 61 |
| Conread position: | 3-465 |
| Cow position: | chr9:28658102-28657649 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 3-465 |
| Cow position: | chr9:53530665-53531107 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 166, 32 |
| Conread position: | 3-465 |
| Cow position: | chr9:59479901-59479449 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 146, 62 |
| Conread position: | 3-466 |
| Cow position: | chr9:52408378-52407909 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 4-236 |
| Cow position: | chr9:49754465-49754239 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 167, 70 |
| Conread position: | 4-379 |
| Cow position: | chr9:26280788-26281166 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 111, 60 |
| Conread position: | 4-435 |
| Cow position: | chr9:26100510-26100092 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 63 |
| Conread position: | 9-465 |
| Cow position: | chr9:16159455-16159910 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 10-379 |
| Cow position: | chr9:20506065-20506427 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 13-413 |
| Cow position: | chr9:33477859-33478252 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 13-456 |
| Cow position: | chr9:5517144-5517577 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 18-413 |
| Cow position: | chr9:13117618-13117228 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 113, 45 |
| Conread position: | 21-424 |
| Cow position: | chr9:6329427-6329037 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 169, 28 |
| Conread position: | 24-497 |
| Cow position: | chr9:22842825-22842360 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 154 |
Show alignments to all cow chromosomes.