Cow genome map
| Conread name: | Spl1-SPL010025A02 |
| Conread position: | 2-124 |
| Cow position: | chr15:36391678-36391551 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-128 |
| Cow position: | chr15:49273961-49273837 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 3-122 |
| Cow position: | chr15:43626471-43626346 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-132 |
| Cow position: | chr15:5408895-5409023 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 3-133 |
| Cow position: | chr15:22531669-22531545 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-140 |
| Cow position: | chr15:19950481-19950350 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-143 |
| Cow position: | chr15:20459306-20459448 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 3-146 |
| Cow position: | chr15:43114718-43114862 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 4-128 |
| Cow position: | chr15:19553923-19554051 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-135 |
| Cow position: | chr15:40562681-40562811 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 5-121 |
| Cow position: | chr15:795021-795135 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 5-132 |
| Cow position: | chr15:52791943-52791813 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 5-133 |
| Cow position: | chr15:35642015-35641884 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 5-134 |
| Cow position: | chr15:26896694-26896828 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 5-141 |
| Cow position: | chr15:41049462-41049597 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 5-143 |
| Cow position: | chr15:21821924-21822067 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-135 |
| Cow position: | chr15:21893778-21893648 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 6-136 |
| Cow position: | chr15:15147206-15147339 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 7-128 |
| Cow position: | chr15:36353666-36353542 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 7-140 |
| Cow position: | chr15:47920152-47920282 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 7-146 |
| Cow position: | chr15:13513530-13513393 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 7-146 |
| Cow position: | chr15:22553543-22553680 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 7-153 |
| Cow position: | chr15:11908948-11909094 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 7-163 |
| Cow position: | chr15:25208759-25208919 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 9-162 |
| Cow position: | chr15:25125144-25124994 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 12-140 |
| Cow position: | chr15:10199324-10199200 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 37-133 |
| Cow position: | chr15:5273400-5273302 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.