Cow genome map
| Conread name: | Spl1-SPL010025A02 |
| Conread position: | 1-127 |
| Cow position: | chr16:11083083-11083208 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-112 |
| Cow position: | chr16:51143887-51143997 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-112 |
| Cow position: | chr16:56579996-56580104 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 3-117 |
| Cow position: | chr16:14242456-14242571 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-119 |
| Cow position: | chr16:44138405-44138286 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 3-121 |
| Cow position: | chr16:50569351-50569467 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-128 |
| Cow position: | chr16:30646600-30646724 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 3-134 |
| Cow position: | chr16:18206047-18206180 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 3-137 |
| Cow position: | chr16:31558989-31559125 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 3-138 |
| Cow position: | chr16:35297489-35297624 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 129 |
| Conread position: | 3-139 |
| Cow position: | chr16:39646701-39646835 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 38 |
| Conread position: | 3-140 |
| Cow position: | chr16:25419166-25419022 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 3-141 |
| Cow position: | chr16:4062693-4062561 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 3-143 |
| Cow position: | chr16:18572967-18572826 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-156 |
| Cow position: | chr16:38663623-38663465 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-159 |
| Cow position: | chr16:42253313-42253160 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 4-142 |
| Cow position: | chr16:22984842-22984975 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 5-121 |
| Cow position: | chr16:12324545-12324660 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 5-139 |
| Cow position: | chr16:7665727-7665863 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 5-146 |
| Cow position: | chr16:19282095-19282238 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 5-154 |
| Cow position: | chr16:17746126-17746274 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 128, 36 |
| Conread position: | 5-156 |
| Cow position: | chr16:51216956-51216804 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 7-118 |
| Cow position: | chr16:48130303-48130192 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-119 |
| Cow position: | chr16:23681454-23681566 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-133 |
| Cow position: | chr16:31149469-31149594 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-135 |
| Cow position: | chr16:23881120-23880991 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:31011419-31011567 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-201 |
| Cow position: | chr16:5396725-5396532 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 116 |
| Conread position: | 8-136 |
| Cow position: | chr16:49860328-49860455 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 9-128 |
| Cow position: | chr16:48613383-48613262 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 9-144 |
| Cow position: | chr16:4911352-4911220 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 32 |
| Conread position: | 12-141 |
| Cow position: | chr16:11584308-11584179 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 41 |
| Conread position: | 12-146 |
| Cow position: | chr16:9730110-9729971 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 94 |
Show alignments to all cow chromosomes.