Cow genome map
| Conread name: | Spl1-SPL010025A02 |
| Conread position: | 1-112 |
| Cow position: | chr22:23675886-23675779 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-127 |
| Cow position: | chr22:44410803-44410924 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 3-115 |
| Cow position: | chr22:4156733-4156619 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-116 |
| Cow position: | chr22:22860828-22860713 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 3-118 |
| Cow position: | chr22:12997752-12997639 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 3-128 |
| Cow position: | chr22:8287267-8287390 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 3-128 |
| Cow position: | chr22:30293772-30293900 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 3-128 |
| Cow position: | chr22:37201933-37202058 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 3-128 |
| Cow position: | chr22:45771940-45771817 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-130 |
| Cow position: | chr22:2876714-2876588 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 3-135 |
| Cow position: | chr22:14143037-14142907 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 3-136 |
| Cow position: | chr22:2409048-2408911 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-140 |
| Cow position: | chr22:27275546-27275688 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-141 |
| Cow position: | chr22:530494-530352 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-141 |
| Cow position: | chr22:8883095-8883232 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 3-145 |
| Cow position: | chr22:16442346-16442483 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 3-145 |
| Cow position: | chr22:18403329-18403470 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 3-150 |
| Cow position: | chr22:33399405-33399256 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-203 |
| Cow position: | chr22:29345673-29345879 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 4-136 |
| Cow position: | chr22:1714780-1714645 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 4-142 |
| Cow position: | chr22:33447996-33447854 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 4-151 |
| Cow position: | chr22:23630267-23630123 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 5-128 |
| Cow position: | chr22:15490740-15490868 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 5-128 |
| Cow position: | chr22:31599517-31599641 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 111 |
| Conread position: | 5-129 |
| Cow position: | chr22:1849160-1849287 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 5-131 |
| Cow position: | chr22:39507955-39507829 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 5-151 |
| Cow position: | chr22:12678336-12678189 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 120 |
| Conread position: | 5-152 |
| Cow position: | chr22:14488021-14488171 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 5-153 |
| Cow position: | chr22:5837344-5837499 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 5-153 |
| Cow position: | chr22:12777291-12777149 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 5-157 |
| Cow position: | chr22:9372607-9372767 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 7-119 |
| Cow position: | chr22:7584153-7584042 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 7-122 |
| Cow position: | chr22:16813884-16813999 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-122 |
| Cow position: | chr22:44717809-44717923 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 7-124 |
| Cow position: | chr22:9735357-9735473 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 7-127 |
| Cow position: | chr22:30818300-30818415 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 7-132 |
| Cow position: | chr22:40349431-40349554 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-137 |
| Cow position: | chr22:12573292-12573425 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-142 |
| Cow position: | chr22:29546727-29546861 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-143 |
| Cow position: | chr22:24903680-24903818 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 15-139 |
| Cow position: | chr22:11134830-11134952 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 25-153 |
| Cow position: | chr22:8733240-8733112 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 6, 121 |
| Conread position: | 33-134 |
| Cow position: | chr22:20846991-20847092 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-158 |
| Cow position: | chr22:25237014-25236888 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.