Cow genome map


           Conread name:
           Spl1-SPL01A110071
        

               Conread position:
               3-786
               

               Cow position:
               chr18:28209397-28210170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               797
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 32
               

               Conread position:
               90-637
               

               Cow position:
               chr18:14816915-14816331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 18
               

               Conread position:
               90-700
               

               Cow position:
               chr18:43129771-43129146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               243-801
               

               Cow position:
               chr18:48529627-48529060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 19
               

               Conread position:
               249-526
               

               Cow position:
               chr18:36606094-36605820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               295-660
               

               Cow position:
               chr18:41900496-41900873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               310-608
               

               Cow position:
               chr18:44180293-44180578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               205, 52
               

               Conread position:
               361-789
               

               Cow position:
               chr18:35740007-35739577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               102, 141
               

               Conread position:
               364-784
               

               Cow position:
               chr18:10978389-10977968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               236, 104
               

               Conread position:
               529-808
               

               Cow position:
               chr18:969914-969628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 64
               
Show alignments to all cow chromosomes.