Cow genome map


           Conread name:
           Spl1-SPL01A110071
        

               Conread position:
               9-804
               

               Cow position:
               chr4:1984317-1983496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               852
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               18-795
               

               Cow position:
               chr4:11104306-11105091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               817
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               71-489
               

               Cow position:
               chr4:30302303-30302727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               137, 22
               

               Conread position:
               96-529
               

               Cow position:
               chr4:39262436-39262860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               264, 100
               

               Conread position:
               106-801
               

               Cow position:
               chr4:22492588-22491864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               739
               

               Alignm identity:
               467
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               71, 7
               

               Conread position:
               109-513
               

               Cow position:
               chr4:59556958-59557388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               91, 397
               

               Conread position:
               133-808
               

               Cow position:
               chr4:23451731-23452437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               717
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               144-786
               

               Cow position:
               chr4:32000842-32000186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               683
               

               Alignm identity:
               445
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               232-808
               

               Cow position:
               chr4:453914-453342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               596
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               251-801
               

               Cow position:
               chr4:1187202-1187771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               457-806
               

               Cow position:
               chr4:43028198-43028544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               161, 23
               

               Conread position:
               614-808
               

               Cow position:
               chr4:20789341-20789141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               101, 46
               
Show alignments to all cow chromosomes.