Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-210
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-276
Cow position:
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-286
Cow position:
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-380
Cow position:
Alignm length: 380
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-456
Cow position:
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 32

Conread position: 1-465
Cow position:
Alignm length: 465
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-470
Cow position:
Alignm length: 471
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-476
Cow position:
Alignm length: 476
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-479
Cow position:
Alignm length: 480
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 85

Conread position: 1-480
Cow position:
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 32

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 30

Conread position: 1-483
Cow position:
Alignm length: 488
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 32

Conread position: 1-483
Cow position:
Alignm length: 487
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 24

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 32

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 1-485
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position:
Alignm length: 489
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-503
Cow position:
Alignm length: 505
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 24

Conread position: 1-503
Cow position:
Alignm length: 509
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 29

Conread position: 1-503
Cow position:
Alignm length: 521
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 25

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 27

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 27

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-504
Cow position:
Alignm length: 508
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-507
Cow position:
Alignm length: 516
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 31

Conread position: 1-510
Cow position:
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 32

Conread position: 1-511
Cow position:
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 16

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-537
Cow position:
Alignm length: 538
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 34

Conread position: 1-537
Cow position:
Alignm length: 537
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-541
Cow position:
Alignm length: 547
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-553
Cow position:
Alignm length: 561
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 30

Conread position: 1-563
Cow position:
Alignm length: 571
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 27

Conread position: 1-586
Cow position:
Alignm length: 591
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 22

Conread position: 1-612
Cow position:
Alignm length: 614
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 19

Conread position: 1-616
Cow position:
Alignm length: 616
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-283
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 2-503
Cow position:
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-503
Cow position:
Alignm length: 508
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 31

Conread position: 2-503
Cow position:
Alignm length: 502
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 2-561
Cow position:
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 499, 31

Conread position: 2-593
Cow position:
Alignm length: 595
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 28

Conread position: 3-503
Cow position:
Alignm length: 501
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-162
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 5-163
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 5-185
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 156, 28

Conread position: 5-197
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 5-207
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 5-371
Cow position:
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-428
Cow position:
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 28

Conread position: 5-480
Cow position:
Alignm length: 476
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position:
Alignm length: 480
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 26

Conread position: 5-483
Cow position:
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 28

Conread position: 5-486
Cow position:
Alignm length: 483
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 28

Conread position: 5-488
Cow position:
Alignm length: 484
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-496
Cow position:
Alignm length: 495
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 83

Conread position: 5-496
Cow position:
Alignm length: 493
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 21

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 499
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 499
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-503
Cow position:
Alignm length: 499
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-503
Cow position:
Alignm length: 503
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 16

Conread position: 5-541
Cow position:
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-542
Cow position:
Alignm length: 543
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 28

Conread position: 6-372
Cow position:
Alignm length: 367
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-496
Cow position:
Alignm length: 492
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 24

Conread position: 6-502
Cow position:
Alignm length: 497
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-587
Cow position:
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 7-503
Cow position:
Alignm length: 499
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 81

Conread position: 7-526
Cow position:
Alignm length: 520
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 9-576
Cow position:
Alignm length: 569
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 509, 25

Conread position: 12-501
Cow position:
Alignm length: 491
Alignm identity: 310
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 8, 24

Conread position: 13-485
Cow position:
Alignm length: 473
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 14-224
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 74

Conread position: 14-412
Cow position:
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 14

Conread position: 15-476
Cow position:
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 13

Conread position: 15-504
Cow position:
Alignm length: 494
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 18

Conread position: 18-263
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 18-470
Cow position:
Alignm length: 463
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 13

Conread position: 18-541
Cow position:
Alignm length: 529
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 34

Conread position: 18-541
Cow position:
Alignm length: 525
Alignm identity: 330
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 485, 12

Conread position: 18-581
Cow position:
Alignm length: 565
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 12

Conread position: 21-501
Cow position:
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 21-503
Cow position:
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 21-571
Cow position:
Alignm length: 555
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 24-503
Cow position:
Alignm length: 480
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 28-551
Cow position:
Alignm length: 527
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 489, 7

Conread position: 29-195
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 29-480
Cow position:
Alignm length: 452
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 31-503
Cow position:
Alignm length: 473
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 31-558
Cow position:
Alignm length: 533
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 55

Conread position: 44-470
Cow position:
Alignm length: 428
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 39

Conread position: 57-526
Cow position:
Alignm length: 470
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 92-489
Cow position:
Alignm length: 398
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 93-503
Cow position:
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 247

Conread position: 95-548
Cow position:
Alignm length: 459
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 245

Conread position: 113-593
Cow position:
Alignm length: 494
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 39

Conread position: 114-585
Cow position:
Alignm length: 479
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 93

Conread position: 133-483
Cow position:
Alignm length: 351
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 141-435
Cow position:
Alignm length: 301
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 188

Conread position: 149-503
Cow position:
Alignm length: 355
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 175-699
Cow position:
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 30

Conread position: 181-585
Cow position:
Alignm length: 407
Alignm identity: 264
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 363, 39

Conread position: 209-500
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 63

Conread position: 231-523
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 273-541
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 230, 22

Conread position: 292-750
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 302-806
Cow position:
Alignm length: 508
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 46

Conread position: 322-806
Cow position:
Alignm length: 488
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 26

Conread position: 326-805
Cow position:
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 24

Conread position: 342-545
Cow position:
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 343-503
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 343-742
Cow position:
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 158

Conread position: 352-503
Cow position:
Alignm length: 152
Alignm identity: 128
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 409-523
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 435-586
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 438-693
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 0

Conread position: 451-593
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 16

Conread position: 510-806
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 136

Show alignments to all cow chromosomes.