Cow genome map
| Conread name: | Spl1-SPL01C060046 |
| Conread position: | 1-210 |
| Cow position: | chr1:89809804-89809599 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-276 |
| Cow position: | chr1:40513681-40513413 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-286 |
| Cow position: | chr1:62805990-62805707 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-380 |
| Cow position: | chr1:25549879-25550249 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-456 |
| Cow position: | chr1:102549046-102549513 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 32 |
| Conread position: | 1-465 |
| Cow position: | chr1:55775970-55776413 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-470 |
| Cow position: | chr1:52359460-52358996 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 32 |
| Conread position: | 1-476 |
| Cow position: | chr1:72187055-72186590 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-479 |
| Cow position: | chr1:63605967-63605490 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 471, 85 |
| Conread position: | 1-480 |
| Cow position: | chr1:58335652-58336127 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 471, 32 |
| Conread position: | 1-483 |
| Cow position: | chr1:3386190-3385726 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:25180215-25179736 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:28872893-28873368 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:49974375-49973896 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:56194115-56193637 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:67286306-67286780 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 30 |
| Conread position: | 1-483 |
| Cow position: | chr1:68607732-68607249 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 32 |
| Conread position: | 1-483 |
| Cow position: | chr1:76545724-76545245 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 24 |
| Conread position: | 1-483 |
| Cow position: | chr1:76623129-76622663 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:78289697-78290158 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:79457151-79456678 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-483 |
| Cow position: | chr1:85780962-85780486 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 32 |
| Conread position: | 1-483 |
| Cow position: | chr1:86699402-86698923 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 32 |
| Conread position: | 1-483 |
| Cow position: | chr1:102435212-102434745 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 1-485 |
| Cow position: | chr1:69402808-69403276 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-489 |
| Cow position: | chr1:79335988-79335504 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-503 |
| Cow position: | chr1:8824878-8825364 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-503 |
| Cow position: | chr1:13645547-13646026 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-503 |
| Cow position: | chr1:28801610-28801086 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 1-503 |
| Cow position: | chr1:40307883-40308372 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 24 |
| Conread position: | 1-503 |
| Cow position: | chr1:72656798-72657301 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 29 |
| Conread position: | 1-503 |
| Cow position: | chr1:87244615-87245125 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 25 |
| Conread position: | 1-503 |
| Cow position: | chr1:88635191-88635685 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-503 |
| Cow position: | chr1:89899886-89899391 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 27 |
| Conread position: | 1-503 |
| Cow position: | chr1:97123648-97124122 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 27 |
| Conread position: | 1-503 |
| Cow position: | chr1:97226884-97226397 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-504 |
| Cow position: | chr1:69766280-69766782 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 490, 32 |
| Conread position: | 1-507 |
| Cow position: | chr1:18244573-18244065 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 1-510 |
| Cow position: | chr1:56144514-56144017 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 32 |
| Conread position: | 1-511 |
| Cow position: | chr1:52918800-52918306 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 1-526 |
| Cow position: | chr1:91893295-91892786 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-537 |
| Cow position: | chr1:57367316-57366785 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 495, 34 |
| Conread position: | 1-537 |
| Cow position: | chr1:57567766-57568300 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-541 |
| Cow position: | chr1:82564320-82564860 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 490, 32 |
| Conread position: | 1-553 |
| Cow position: | chr1:34689158-34689706 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 30 |
| Conread position: | 1-563 |
| Cow position: | chr1:45097524-45098076 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 454, 27 |
| Conread position: | 1-586 |
| Cow position: | chr1:31330968-31330394 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 1-612 |
| Cow position: | chr1:72136459-72137060 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 19 |
| Conread position: | 1-616 |
| Cow position: | chr1:5318576-5319168 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-283 |
| Cow position: | chr1:17941994-17941715 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-503 |
| Cow position: | chr1:1461510-1461018 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-503 |
| Cow position: | chr1:72080589-72081093 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 31 |
| Conread position: | 2-503 |
| Cow position: | chr1:82918841-82918350 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-561 |
| Cow position: | chr1:31366260-31365709 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 499, 31 |
| Conread position: | 2-593 |
| Cow position: | chr1:13879952-13880520 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 28 |
| Conread position: | 3-503 |
| Cow position: | chr1:89770864-89770370 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-162 |
| Cow position: | chr1:31396236-31396388 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-163 |
| Cow position: | chr1:43019945-43020099 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-185 |
| Cow position: | chr1:85881562-85881741 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 156, 28 |
| Conread position: | 5-197 |
| Cow position: | chr1:22864098-22863908 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-207 |
| Cow position: | chr1:13253615-13253418 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 5-371 |
| Cow position: | chr1:79920907-79920544 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-428 |
| Cow position: | chr1:33895499-33895920 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 28 |
| Conread position: | 5-480 |
| Cow position: | chr1:55276666-55276193 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-483 |
| Cow position: | chr1:33550743-33551212 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 26 |
| Conread position: | 5-483 |
| Cow position: | chr1:88130578-88131065 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 28 |
| Conread position: | 5-486 |
| Cow position: | chr1:56489659-56490138 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 28 |
| Conread position: | 5-488 |
| Cow position: | chr1:40684870-40684391 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-489 |
| Cow position: | chr1:59210314-59209838 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-496 |
| Cow position: | chr1:42290212-42290691 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 83 |
| Conread position: | 5-496 |
| Cow position: | chr1:101858163-101857678 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 487, 21 |
| Conread position: | 5-502 |
| Cow position: | chr1:8554148-8554642 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-502 |
| Cow position: | chr1:17012916-17012425 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 5-502 |
| Cow position: | chr1:18880565-18880079 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-502 |
| Cow position: | chr1:61308822-61309317 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 28 |
| Conread position: | 5-502 |
| Cow position: | chr1:86548311-86547821 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-503 |
| Cow position: | chr1:38414627-38415112 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 5-503 |
| Cow position: | chr1:71562755-71562259 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 16 |
| Conread position: | 5-541 |
| Cow position: | chr1:11292284-11291749 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 28 |
| Conread position: | 5-541 |
| Cow position: | chr1:21087236-21087770 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 16 |
| Conread position: | 5-541 |
| Cow position: | chr1:28710736-28711273 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 28 |
| Conread position: | 5-541 |
| Cow position: | chr1:33851099-33851634 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 483, 28 |
| Conread position: | 5-541 |
| Cow position: | chr1:40053175-40053712 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 28 |
| Conread position: | 5-541 |
| Cow position: | chr1:80359346-80358824 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 16 |
| Conread position: | 5-542 |
| Cow position: | chr1:39543591-39544127 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 493, 28 |
| Conread position: | 6-372 |
| Cow position: | chr1:15347764-15347400 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 6-496 |
| Cow position: | chr1:52233290-52232807 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 484, 24 |
| Conread position: | 6-502 |
| Cow position: | chr1:62925434-62925927 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 6-587 |
| Cow position: | chr1:30027720-30027152 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 7-503 |
| Cow position: | chr1:33711882-33712378 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 7-526 |
| Cow position: | chr1:22000134-21999620 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 9-576 |
| Cow position: | chr1:11863412-11862873 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 509, 25 |
| Conread position: | 12-501 |
| Cow position: | chr1:59644681-59645148 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 310 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 13-485 |
| Cow position: | chr1:67835310-67834843 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 14-224 |
| Cow position: | chr1:79885003-79884794 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 14-412 |
| Cow position: | chr1:37419916-37419530 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 14 |
| Conread position: | 15-476 |
| Cow position: | chr1:89740413-89739982 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 15-504 |
| Cow position: | chr1:13450040-13450526 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 476, 18 |
| Conread position: | 18-263 |
| Cow position: | chr1:6708261-6708019 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 18-470 |
| Cow position: | chr1:99910784-99911240 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 13 |
| Conread position: | 18-541 |
| Cow position: | chr1:30283706-30283186 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 34 |
| Conread position: | 18-541 |
| Cow position: | chr1:80556222-80555731 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 330 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 485, 12 |
| Conread position: | 18-581 |
| Cow position: | chr1:54365988-54365439 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 482, 12 |
| Conread position: | 21-501 |
| Cow position: | chr1:76752820-76752340 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 21-503 |
| Cow position: | chr1:69536740-69537211 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 21-571 |
| Cow position: | chr1:98661461-98660933 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 24-503 |
| Cow position: | chr1:101149673-101150147 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 28-551 |
| Cow position: | chr1:57656393-57656909 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 489, 7 |
| Conread position: | 29-195 |
| Cow position: | chr1:38387800-38387643 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 29-480 |
| Cow position: | chr1:12062351-12061905 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 31-503 |
| Cow position: | chr1:87207572-87207114 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 31-558 |
| Cow position: | chr1:62853997-62853473 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 419, 55 |
| Conread position: | 44-470 |
| Cow position: | chr1:48245669-48246095 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 39 |
| Conread position: | 57-526 |
| Cow position: | chr1:73071186-73070719 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 92-489 |
| Cow position: | chr1:60339210-60339606 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 93-503 |
| Cow position: | chr1:28722778-28723190 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 247 |
| Conread position: | 95-548 |
| Cow position: | chr1:29362204-29362659 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 245 |
| Conread position: | 113-593 |
| Cow position: | chr1:67901992-67901513 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 39 |
| Conread position: | 114-585 |
| Cow position: | chr1:89479248-89479707 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 93 |
| Conread position: | 133-483 |
| Cow position: | chr1:58884122-58883773 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 141-435 |
| Cow position: | chr1:85672063-85671768 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 188 |
| Conread position: | 149-503 |
| Cow position: | chr1:99349073-99348723 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 175-699 |
| Cow position: | chr1:55323067-55322549 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 496, 30 |
| Conread position: | 181-585 |
| Cow position: | chr1:78360739-78361133 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 363, 39 |
| Conread position: | 209-500 |
| Cow position: | chr1:77655719-77656005 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 231-523 |
| Cow position: | chr1:102556098-102556381 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 273-541 |
| Cow position: | chr1:44138259-44137996 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 230, 22 |
| Conread position: | 292-750 |
| Cow position: | chr1:24650861-24651318 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 302-806 |
| Cow position: | chr1:40513264-40512762 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 46 |
| Conread position: | 322-806 |
| Cow position: | chr1:94253052-94253534 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 326-805 |
| Cow position: | chr1:21720027-21720498 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 24 |
| Conread position: | 342-545 |
| Cow position: | chr1:72039195-72038992 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-503 |
| Cow position: | chr1:18027615-18027455 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-742 |
| Cow position: | chr1:42870088-42869685 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 158 |
| Conread position: | 352-503 |
| Cow position: | chr1:87516120-87515969 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-523 |
| Cow position: | chr1:37419552-37419443 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 435-586 |
| Cow position: | chr1:58179897-58179747 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 438-693 |
| Cow position: | chr1:38387458-38387214 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 451-593 |
| Cow position: | chr1:31418696-31418555 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 510-806 |
| Cow position: | chr1:67286827-67287118 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 136 |
Show alignments to all cow chromosomes.