Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 86

Conread position: 1-313
Cow position:
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-393
Cow position:
Alignm length: 393
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-422
Cow position:
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 32

Conread position: 1-427
Cow position:
Alignm length: 427
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-478
Cow position:
Alignm length: 478
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 32

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 29

Conread position: 1-503
Cow position:
Alignm length: 507
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 1-510
Cow position:
Alignm length: 511
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 29

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-570
Cow position:
Alignm length: 586
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 20

Conread position: 1-586
Cow position:
Alignm length: 600
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 30

Conread position: 1-587
Cow position:
Alignm length: 589
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 27

Conread position: 1-593
Cow position:
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 29

Conread position: 2-503
Cow position:
Alignm length: 502
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-241
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 5-288
Cow position:
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-371
Cow position:
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-462
Cow position:
Alignm length: 464
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 8

Conread position: 5-496
Cow position:
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position:
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 16

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 5-541
Cow position:
Alignm length: 545
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 5-541
Cow position:
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 8-502
Cow position:
Alignm length: 514
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 22

Conread position: 10-541
Cow position:
Alignm length: 538
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 23

Conread position: 14-806
Cow position:
Alignm length: 799
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 16

Conread position: 15-483
Cow position:
Alignm length: 472
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 15-583
Cow position:
Alignm length: 580
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 17-456
Cow position:
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 71

Conread position: 18-486
Cow position:
Alignm length: 470
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 15

Conread position: 18-489
Cow position:
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 22-499
Cow position:
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 8

Conread position: 23-504
Cow position:
Alignm length: 494
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 65

Conread position: 28-586
Cow position:
Alignm length: 564
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 55

Conread position: 32-593
Cow position:
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 498, 56

Conread position: 39-593
Cow position:
Alignm length: 557
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 49

Conread position: 43-503
Cow position:
Alignm length: 465
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 43

Conread position: 57-532
Cow position:
Alignm length: 477
Alignm identity: 323
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 211, 10

Conread position: 65-483
Cow position:
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 21

Conread position: 125-503
Cow position:
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 185

Conread position: 141-366
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 39

Conread position: 147-587
Cow position:
Alignm length: 442
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 65

Conread position: 202-595
Cow position:
Alignm length: 394
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 229-593
Cow position:
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 181

Conread position: 273-806
Cow position:
Alignm length: 536
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 75

Conread position: 278-806
Cow position:
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 73

Conread position: 289-567
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 151, 61

Conread position: 335-586
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 197, 13

Conread position: 356-656
Cow position:
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 123

Conread position: 391-544
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 396-503
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 408-606
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 30

Conread position: 421-593
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 109, 38

Conread position: 437-693
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 33

Conread position: 591-803
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 46

Conread position: 591-806
Cow position:
Alignm length: 221
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 673-806
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 673-806
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Show alignments to all cow chromosomes.