Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 191, 11

Conread position: 1-255
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 88

Conread position: 1-380
Cow position:
Alignm length: 380
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-445
Cow position:
Alignm length: 445
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-455
Cow position:
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-478
Cow position:
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 32

Conread position: 1-479
Cow position:
Alignm length: 497
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 24

Conread position: 1-481
Cow position:
Alignm length: 481
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position:
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 493
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 24

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-485
Cow position:
Alignm length: 485
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-486
Cow position:
Alignm length: 487
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 29

Conread position: 1-489
Cow position:
Alignm length: 489
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-499
Cow position:
Alignm length: 500
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 27

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-525
Cow position:
Alignm length: 534
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 32

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-570
Cow position:
Alignm length: 572
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 30

Conread position: 2-503
Cow position:
Alignm length: 502
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 2-544
Cow position:
Alignm length: 551
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 5-253
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 124, 29

Conread position: 5-442
Cow position:
Alignm length: 449
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 22

Conread position: 5-482
Cow position:
Alignm length: 479
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 12

Conread position: 5-483
Cow position:
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-499
Cow position:
Alignm length: 495
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-502
Cow position:
Alignm length: 501
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 28

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-502
Cow position:
Alignm length: 516
Alignm identity: 335
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 191, 25

Conread position: 5-504
Cow position:
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 28

Conread position: 5-504
Cow position:
Alignm length: 505
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 28

Conread position: 5-526
Cow position:
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 29

Conread position: 5-541
Cow position:
Alignm length: 543
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 543
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 544
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 16

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 10-504
Cow position:
Alignm length: 499
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 23

Conread position: 14-503
Cow position:
Alignm length: 500
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 14

Conread position: 15-489
Cow position:
Alignm length: 475
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 17-503
Cow position:
Alignm length: 495
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 13

Conread position: 18-456
Cow position:
Alignm length: 444
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 18-486
Cow position:
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 21-177
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 67

Conread position: 21-461
Cow position:
Alignm length: 441
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 21-503
Cow position:
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 67

Conread position: 21-504
Cow position:
Alignm length: 485
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 61

Conread position: 24-504
Cow position:
Alignm length: 484
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 64

Conread position: 28-496
Cow position:
Alignm length: 471
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 59

Conread position: 32-693
Cow position:
Alignm length: 665
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 57

Conread position: 60-800
Cow position:
Alignm length: 754
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 26

Conread position: 84-532
Cow position:
Alignm length: 461
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 130

Conread position: 93-255
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 113-489
Cow position:
Alignm length: 377
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 113-503
Cow position:
Alignm length: 398
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 115

Conread position: 144-397
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 226-509
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 184, 122

Conread position: 289-556
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 310-499
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 43

Conread position: 321-747
Cow position:
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 27

Conread position: 336-586
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 100

Conread position: 379-499
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 389-503
Cow position:
Alignm length: 115
Alignm identity: 97
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 404-579
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 114, 15

Conread position: 460-653
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 475-806
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 197, 18

Show alignments to all cow chromosomes.