Cow genome map
| Conread name: | Spl1-SPL01C060046 |
| Conread position: | 1-483 |
| Cow position: | chr12:8678354-8677878 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 20 |
| Conread position: | 1-483 |
| Cow position: | chr12:11098006-11098485 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 32 |
| Conread position: | 1-483 |
| Cow position: | chr12:14662846-14662390 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 32 |
| Conread position: | 1-483 |
| Cow position: | chr12:27933181-27932702 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-496 |
| Cow position: | chr12:21254891-21254399 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 491, 32 |
| Conread position: | 1-497 |
| Cow position: | chr12:2563-3056 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 29 |
| Conread position: | 1-503 |
| Cow position: | chr12:2282311-2282809 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-503 |
| Cow position: | chr12:21901711-21902202 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 29 |
| Conread position: | 1-503 |
| Cow position: | chr12:45261379-45261886 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 27 |
| Conread position: | 1-532 |
| Cow position: | chr12:28766252-28765727 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 32 |
| Conread position: | 2-490 |
| Cow position: | chr12:20998354-20997883 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-503 |
| Cow position: | chr12:22332388-22332887 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 30 |
| Conread position: | 4-483 |
| Cow position: | chr12:22205979-22205505 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 5-409 |
| Cow position: | chr12:26141582-26141983 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-503 |
| Cow position: | chr12:8310954-8311444 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-541 |
| Cow position: | chr12:21426465-21426999 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 16 |
| Conread position: | 5-593 |
| Cow position: | chr12:21499887-21500452 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 14-503 |
| Cow position: | chr12:26947202-26946727 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 17-504 |
| Cow position: | chr12:32653325-32653812 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 474, 17 |
| Conread position: | 18-185 |
| Cow position: | chr12:42420342-42420176 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 18-504 |
| Cow position: | chr12:37558338-37558824 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 15 |
| Conread position: | 21-184 |
| Cow position: | chr12:21197611-21197772 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 22-753 |
| Cow position: | chr12:15951475-15950759 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 61 |
| Conread position: | 28-454 |
| Cow position: | chr12:17975340-17975751 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 190-526 |
| Cow position: | chr12:2838903-2838575 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 300-496 |
| Cow position: | chr12:23240065-23240260 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 192, 41 |
| Conread position: | 382-503 |
| Cow position: | chr12:31544920-31545041 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-569 |
| Cow position: | chr12:48405430-48405577 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 8 |
Show alignments to all cow chromosomes.