Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 88

Conread position: 1-212
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 1-306
Cow position:
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-470
Cow position:
Alignm length: 470
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position:
Alignm length: 482
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 24

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-483
Cow position:
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 12

Conread position: 1-483
Cow position:
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 12

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-486
Cow position:
Alignm length: 489
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 29

Conread position: 1-496
Cow position:
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 25

Conread position: 1-524
Cow position:
Alignm length: 525
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-526
Cow position:
Alignm length: 527
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-528
Cow position:
Alignm length: 530
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 24

Conread position: 1-536
Cow position:
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 32

Conread position: 1-618
Cow position:
Alignm length: 620
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 27

Conread position: 1-805
Cow position:
Alignm length: 814
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 30

Conread position: 1-806
Cow position:
Alignm length: 823
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 29

Conread position: 2-496
Cow position:
Alignm length: 497
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 31

Conread position: 5-209
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 23

Conread position: 5-334
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-377
Cow position:
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 5-483
Cow position:
Alignm length: 480
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 26

Conread position: 5-485
Cow position:
Alignm length: 481
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-498
Cow position:
Alignm length: 495
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 25

Conread position: 5-501
Cow position:
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 28

Conread position: 5-504
Cow position:
Alignm length: 503
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-526
Cow position:
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-541
Cow position:
Alignm length: 543
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 28

Conread position: 7-251
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 7-526
Cow position:
Alignm length: 520
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 14-563
Cow position:
Alignm length: 556
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 19

Conread position: 17-470
Cow position:
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-489
Cow position:
Alignm length: 473
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 17

Conread position: 21-497
Cow position:
Alignm length: 478
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 61

Conread position: 21-526
Cow position:
Alignm length: 507
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 14

Conread position: 23-581
Cow position:
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 20

Conread position: 25-586
Cow position:
Alignm length: 586
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 63

Conread position: 28-593
Cow position:
Alignm length: 568
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 7

Conread position: 29-500
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 36-579
Cow position:
Alignm length: 548
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 52

Conread position: 44-483
Cow position:
Alignm length: 440
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 52-507
Cow position:
Alignm length: 466
Alignm identity: 302
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 24

Conread position: 132-593
Cow position:
Alignm length: 478
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 93

Conread position: 140-503
Cow position:
Alignm length: 367
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 165-483
Cow position:
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 228-788
Cow position:
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 34

Conread position: 263-561
Cow position:
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 32

Conread position: 287-538
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 189, 38

Conread position: 293-585
Cow position:
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 55

Conread position: 307-802
Cow position:
Alignm length: 502
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 40

Conread position: 372-632
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 67

Conread position: 375-512
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 382-806
Cow position:
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 149

Conread position: 405-596
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 121

Conread position: 421-606
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 48

Conread position: 453-739
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 568-716
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 591-806
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 619-808
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.