Cow genome map
Conread name: | Spl1-SPL01C060046 |
Conread position: | 1-250 |
Cow position: | chr20:10846258-10846010 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 182 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 209, 30 |
Conread position: | 1-293 |
Cow position: | chr20:7085752-7085470 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 190 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1-481 |
Cow position: | chr20:28160601-28161067 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 1-483 |
Cow position: | chr20:13762726-13763203 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 20 |
Conread position: | 1-483 |
Cow position: | chr20:25851170-25850692 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-483 |
Cow position: | chr20:30684159-30684619 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-496 |
Cow position: | chr20:8313613-8313127 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 20 |
Conread position: | 1-503 |
Cow position: | chr20:15064589-15065084 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 30 |
Conread position: | 1-526 |
Cow position: | chr20:5534762-5535279 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1-526 |
Cow position: | chr20:12438941-12438419 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-526 |
Cow position: | chr20:23469840-23469324 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 33 |
Conread position: | 1-586 |
Cow position: | chr20:22206367-22206938 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 68 |
Conread position: | 2-503 |
Cow position: | chr20:3252312-3251816 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 26 |
Conread position: | 5-212 |
Cow position: | chr20:19192304-19192099 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-246 |
Cow position: | chr20:35119149-35119389 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 141 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 227, 28 |
Conread position: | 5-376 |
Cow position: | chr20:11679286-11678918 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-483 |
Cow position: | chr20:21914150-21914626 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 28 |
Conread position: | 5-483 |
Cow position: | chr20:27869021-27869496 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-483 |
Cow position: | chr20:28565776-28565297 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 84 |
Conread position: | 5-483 |
Cow position: | chr20:35119398-35119868 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 28 |
Conread position: | 5-502 |
Cow position: | chr20:5560891-5560397 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-525 |
Cow position: | chr20:5484014-5484535 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 82 |
Conread position: | 7-578 |
Cow position: | chr20:31379060-31378494 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 97 |
Conread position: | 15-483 |
Cow position: | chr20:8004392-8003927 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 19 |
Conread position: | 17-483 |
Cow position: | chr20:15291854-15292309 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 21-281 |
Cow position: | chr20:10102711-10102461 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 8, 66 |
Conread position: | 21-532 |
Cow position: | chr20:3270551-3271053 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 10 |
Conread position: | 23-541 |
Cow position: | chr20:822608-823128 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 468, 64 |
Conread position: | 23-766 |
Cow position: | chr20:18315742-18315043 (view UCSC Genome Browser custom track) |
Alignm length: | 753 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 28 |
Conread position: | 28-526 |
Cow position: | chr20:15098031-15097535 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 36-553 |
Cow position: | chr20:9954129-9953619 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 496, 52 |
Conread position: | 57-500 |
Cow position: | chr20:15947518-15947064 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 31 |
Conread position: | 70-502 |
Cow position: | chr20:25960991-25961421 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 87-537 |
Cow position: | chr20:13680153-13679700 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 103 |
Conread position: | 132-483 |
Cow position: | chr20:29948448-29948798 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 144-504 |
Cow position: | chr20:3684524-3684168 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 129 |
Conread position: | 231-586 |
Cow position: | chr20:13434902-13434559 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 253-505 |
Cow position: | chr20:35104562-35104309 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 289-503 |
Cow position: | chr20:10846011-10845803 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 335-586 |
Cow position: | chr20:22717589-22717337 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 174 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 72, 15 |
Conread position: | 566-806 |
Cow position: | chr20:8215554-8215795 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 170 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 72, 170 |
Show alignments to all cow chromosomes.