Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-230
Cow position: chr21:1190981-1191214 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 80, 32

Conread position: 1-305
Cow position: chr21:3615231-3615534 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 29

Conread position: 1-321
Cow position: chr21:2716742-2716425 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 30

Conread position: 1-462
Cow position: chr21:47948048-47948505 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-470
Cow position: chr21:10850019-10850484 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr21:3778707-3779184 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr21:31559716-31559238 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-489
Cow position: chr21:48116047-48116525 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 34

Conread position: 1-490
Cow position: chr21:2789052-2788568 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 29

Conread position: 1-503
Cow position: chr21:2530187-2529690 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 29

Conread position: 1-503
Cow position: chr21:4456768-4457264 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-503
Cow position: chr21:13124056-13123568 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chr21:34292958-34293453 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 1-503
Cow position: chr21:35596308-35596804 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-526
Cow position: chr21:30561741-30562263 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-563
Cow position: chr21:2416178-2416717 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 504, 24

Conread position: 2-806
Cow position: chr21:2541475-2540675 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 28

Conread position: 5-264
Cow position: chr21:27708705-27708963 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 5-329
Cow position: chr21:33251335-33251657 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-425
Cow position: chr21:4222744-4222333 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-486
Cow position: chr21:37044856-37045331 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-517
Cow position: chr21:6699612-6699130 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 340
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 262, 25

Conread position: 5-526
Cow position: chr21:145863-146383 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 8

Conread position: 5-541
Cow position: chr21:11505530-11506076 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 16

Conread position: 5-541
Cow position: chr21:39425006-39425543 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 28

Conread position: 5-554
Cow position: chr21:23860726-23861268 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 30

Conread position: 8-560
Cow position: chr21:36714578-36715124 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 22

Conread position: 18-489
Cow position: chr21:11453700-11453232 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-525
Cow position: chr21:4076801-4077299 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 472, 12

Conread position: 18-693
Cow position: chr21:23811832-23812504 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 616, 12

Conread position: 21-196
Cow position: chr21:17572880-17573053 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 21-523
Cow position: chr21:7267583-7267074 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 65

Conread position: 23-486
Cow position: chr21:4590029-4589570 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 8

Conread position: 24-564
Cow position: chr21:2674665-2674111 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 9

Conread position: 25-444
Cow position: chr21:3426447-3426864 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 28-300
Cow position: chr21:26819056-26818785 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 29-802
Cow position: chr21:4183491-4184236 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 33-503
Cow position: chr21:2883778-2883311 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 53

Conread position: 34-806
Cow position: chr21:9891574-9892354 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 52

Conread position: 48-483
Cow position: chr21:27282372-27282803 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 38

Conread position: 59-522
Cow position: chr21:8678364-8677903 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 59-541
Cow position: chr21:6339562-6340046 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 28

Conread position: 113-503
Cow position: chr21:40271628-40271238 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 227

Conread position: 117-503
Cow position: chr21:3798314-3797933 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 195-524
Cow position: chr21:4086933-4087261 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 251-711
Cow position: chr21:30226206-30226656 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 97

Conread position: 274-504
Cow position: chr21:3615531-3615750 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 317-802
Cow position: chr21:359287-359768 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 31

Conread position: 326-503
Cow position: chr21:34258728-34258551 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 74, 24

Conread position: 342-798
Cow position: chr21:9870023-9870468 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 180

Conread position: 358-496
Cow position: chr21:2716425-2716286 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 120
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 0

Conread position: 401-797
Cow position: chr21:29105-29498 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Show alignments to all cow chromosomes.