Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-195
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 65, 27

Conread position: 1-338
Cow position:
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 1-452
Cow position:
Alignm length: 452
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-481
Cow position:
Alignm length: 482
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 32

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-485
Cow position:
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-489
Cow position:
Alignm length: 490
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-490
Cow position:
Alignm length: 491
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 1-503
Cow position:
Alignm length: 511
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 89

Conread position: 1-504
Cow position:
Alignm length: 510
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 32

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-526
Cow position:
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-558
Cow position:
Alignm length: 564
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 25

Conread position: 1-574
Cow position:
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 32

Conread position: 1-575
Cow position:
Alignm length: 575
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-584
Cow position:
Alignm length: 589
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 29

Conread position: 1-606
Cow position:
Alignm length: 607
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 535, 50

Conread position: 1-740
Cow position:
Alignm length: 746
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 27

Conread position: 2-594
Cow position:
Alignm length: 600
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 509, 32

Conread position: 4-526
Cow position:
Alignm length: 526
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 12

Conread position: 5-266
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-443
Cow position:
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 510
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 16

Conread position: 5-496
Cow position:
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 28

Conread position: 5-501
Cow position:
Alignm length: 502
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 5-502
Cow position:
Alignm length: 510
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 21

Conread position: 5-503
Cow position:
Alignm length: 499
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-540
Cow position:
Alignm length: 541
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-574
Cow position:
Alignm length: 580
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 5-606
Cow position:
Alignm length: 608
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 6-537
Cow position:
Alignm length: 534
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 27

Conread position: 6-806
Cow position:
Alignm length: 805
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 19

Conread position: 7-483
Cow position:
Alignm length: 478
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 75

Conread position: 14-483
Cow position:
Alignm length: 474
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 19

Conread position: 18-205
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 185, 12

Conread position: 18-504
Cow position:
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 21-503
Cow position:
Alignm length: 486
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 12

Conread position: 21-563
Cow position:
Alignm length: 548
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 11

Conread position: 22-750
Cow position:
Alignm length: 735
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 62

Conread position: 23-505
Cow position:
Alignm length: 486
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 10

Conread position: 23-805
Cow position:
Alignm length: 798
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 63

Conread position: 27-577
Cow position:
Alignm length: 554
Alignm identity: 345
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 24

Conread position: 28-425
Cow position:
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 48

Conread position: 28-503
Cow position:
Alignm length: 477
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 22

Conread position: 28-503
Cow position:
Alignm length: 477
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 58

Conread position: 28-537
Cow position:
Alignm length: 515
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 61

Conread position: 31-806
Cow position:
Alignm length: 781
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 45

Conread position: 57-517
Cow position:
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 100

Conread position: 57-700
Cow position:
Alignm length: 645
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 614, 29

Conread position: 66-504
Cow position:
Alignm length: 441
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 20

Conread position: 72-503
Cow position:
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 87-489
Cow position:
Alignm length: 403
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 89-326
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 142

Conread position: 115-552
Cow position:
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 101

Conread position: 132-316
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 132-503
Cow position:
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 141-541
Cow position:
Alignm length: 406
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 199

Conread position: 239-563
Cow position:
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 109

Conread position: 279-806
Cow position:
Alignm length: 531
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 69

Conread position: 289-805
Cow position:
Alignm length: 519
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 59

Conread position: 341-577
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 29

Conread position: 398-503
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 473-806
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 22

Conread position: 502-766
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 169, 179

Conread position: 564-806
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 112, 34

Conread position: 603-806
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 174

Conread position: 603-806
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 79

Show alignments to all cow chromosomes.