Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-414
Cow position: chr23:4815839-4816251 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 32

Conread position: 1-461
Cow position: chr23:2524429-2523974 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-461
Cow position: chr23:5875005-5874559 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 1-479
Cow position: chr23:28913179-28913637 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr23:967581-967105 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 1-483
Cow position: chr23:4888447-4888918 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr23:15525380-15525855 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-483
Cow position: chr23:22147492-22147009 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-488
Cow position: chr23:36031602-36031123 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr23:988874-988383 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 29

Conread position: 1-503
Cow position: chr23:4276725-4277220 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 10

Conread position: 1-526
Cow position: chr23:2757346-2757882 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 32

Conread position: 1-526
Cow position: chr23:3881928-3881417 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-526
Cow position: chr23:4640858-4640336 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr23:11778252-11778776 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 32

Conread position: 1-526
Cow position: chr23:30636535-30636013 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 32

Conread position: 1-538
Cow position: chr23:27399270-27399801 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 32

Conread position: 1-563
Cow position: chr23:16617084-16616515 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 1-568
Cow position: chr23:15220131-15219563 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 32

Conread position: 1-586
Cow position: chr23:19332630-19332064 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 27

Conread position: 2-504
Cow position: chr23:7273425-7273897 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 29

Conread position: 4-563
Cow position: chr23:14974795-14974233 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 86

Conread position: 5-489
Cow position: chr23:4359600-4360081 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-489
Cow position: chr23:20301982-20302463 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 5-489
Cow position: chr23:28217061-28217541 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 28

Conread position: 5-502
Cow position: chr23:31446585-31447079 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-523
Cow position: chr23:5779314-5778803 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-524
Cow position: chr23:4434235-4434744 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 30

Conread position: 5-541
Cow position: chr23:2313467-2312932 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr23:19950813-19950279 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 28

Conread position: 6-480
Cow position: chr23:20156459-20155973 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 14

Conread position: 10-552
Cow position: chr23:39026224-39026764 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 337
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 54, 13

Conread position: 15-446
Cow position: chr23:3013427-3013854 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 13

Conread position: 18-483
Cow position: chr23:19489321-19489787 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 13

Conread position: 21-503
Cow position: chr23:4509889-4510342 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 12

Conread position: 31-500
Cow position: chr23:25611833-25612284 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 289
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 139, 29

Conread position: 39-635
Cow position: chr23:38578095-38578674 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 49

Conread position: 42-500
Cow position: chr23:6216380-6216833 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 60-503
Cow position: chr23:31591983-31591537 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 63-517
Cow position: chr23:25684231-25683786 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 19

Conread position: 114-697
Cow position: chr23:29474676-29474100 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 56

Conread position: 132-609
Cow position: chr23:1327565-1327102 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 138

Conread position: 229-503
Cow position: chr23:8980318-8980056 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 287-503
Cow position: chr23:2765403-2765188 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 287-600
Cow position: chr23:22875623-22875323 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 60

Conread position: 358-585
Cow position: chr23:31650790-31650567 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 115, 54

Conread position: 400-643
Cow position: chr23:1402719-1402481 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 35

Show alignments to all cow chromosomes.