Cow genome map
Conread name: | Spl1-SPL01C060046 |
Conread position: | 1-256 |
Cow position: | chr24:13531678-13531431 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1-443 |
Cow position: | chr24:22951988-22952427 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-479 |
Cow position: | chr24:4415671-4415202 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-483 |
Cow position: | chr24:14384759-14384284 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 34 |
Conread position: | 1-483 |
Cow position: | chr24:19833236-19833716 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 24 |
Conread position: | 1-483 |
Cow position: | chr24:33933220-33933697 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-502 |
Cow position: | chr24:14584946-14585426 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-503 |
Cow position: | chr24:6145212-6145719 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 27 |
Conread position: | 1-504 |
Cow position: | chr24:35838773-35838265 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 29 |
Conread position: | 1-556 |
Cow position: | chr24:17303744-17303213 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 347, 32 |
Conread position: | 1-805 |
Cow position: | chr24:12797908-12797120 (view UCSC Genome Browser custom track) |
Alignm length: | 806 |
Alignm identity: | 599 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 670, 21 |
Conread position: | 1-806 |
Cow position: | chr24:16649448-16648671 (view UCSC Genome Browser custom track) |
Alignm length: | 808 |
Alignm identity: | 589 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 31 |
Conread position: | 1-806 |
Cow position: | chr24:36560231-36559442 (view UCSC Genome Browser custom track) |
Alignm length: | 810 |
Alignm identity: | 591 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 670, 29 |
Conread position: | 5-187 |
Cow position: | chr24:13021528-13021704 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 5-315 |
Cow position: | chr24:7060958-7061264 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-464 |
Cow position: | chr24:44017402-44017858 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-485 |
Cow position: | chr24:6025239-6024765 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-489 |
Cow position: | chr24:12485461-12484980 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-489 |
Cow position: | chr24:13188044-13188510 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 360, 16 |
Conread position: | 5-489 |
Cow position: | chr24:22793033-22793509 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 5-489 |
Cow position: | chr24:33739488-33739003 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 28 |
Conread position: | 5-496 |
Cow position: | chr24:9188875-9188387 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 28 |
Conread position: | 5-497 |
Cow position: | chr24:6083873-6084362 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-502 |
Cow position: | chr24:8030007-8030501 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-503 |
Cow position: | chr24:12086056-12086549 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 26 |
Conread position: | 5-606 |
Cow position: | chr24:9092417-9091827 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 489, 26 |
Conread position: | 5-758 |
Cow position: | chr24:2635976-2636724 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 6-412 |
Cow position: | chr24:12161736-12162134 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 13-533 |
Cow position: | chr24:6335563-6336060 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 14-526 |
Cow position: | chr24:12335930-12335401 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 74 |
Conread position: | 14-587 |
Cow position: | chr24:35841748-35841187 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 18-308 |
Cow position: | chr24:6645284-6645570 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 22-399 |
Cow position: | chr24:12131614-12131239 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 66 |
Conread position: | 23-586 |
Cow position: | chr24:12568122-12568663 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 66 |
Conread position: | 31-475 |
Cow position: | chr24:15392428-15392017 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 33-502 |
Cow position: | chr24:40548760-40549224 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 54 |
Conread position: | 65-501 |
Cow position: | chr24:37216919-37217348 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 21 |
Conread position: | 94-504 |
Cow position: | chr24:6660665-6660246 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 167 |
Conread position: | 334-569 |
Cow position: | chr24:16376708-16376934 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 14 |
Conread position: | 346-613 |
Cow position: | chr24:14333237-14333503 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 188 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 256, 0 |
Conread position: | 357-585 |
Cow position: | chr24:38636810-38637039 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 157 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 173, 0 |
Conread position: | 383-593 |
Cow position: | chr24:13302754-13302545 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 138, 55 |
Conread position: | 516-806 |
Cow position: | chr24:12206273-12205990 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 199 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 151, 113 |
Conread position: | 573-805 |
Cow position: | chr24:36708344-36708572 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 159 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 22, 44 |
Conread position: | 671-806 |
Cow position: | chr24:6336032-6336169 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.