Cow genome map
| Conread name: | Spl1-SPL01C060046 |
| Conread position: | 1-199 |
| Cow position: | chr25:18411482-18411284 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 1-254 |
| Cow position: | chr25:26867034-26867272 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-255 |
| Cow position: | chr25:18173169-18173423 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 1-445 |
| Cow position: | chr25:18027820-18027376 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 1-482 |
| Cow position: | chr25:25506459-25506935 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-483 |
| Cow position: | chr25:13780845-13781317 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-496 |
| Cow position: | chr25:11375537-11375048 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 27 |
| Conread position: | 1-500 |
| Cow position: | chr25:20494171-20494653 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 1-503 |
| Cow position: | chr25:8674724-8675223 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-503 |
| Cow position: | chr25:14015986-14016472 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 12 |
| Conread position: | 1-503 |
| Cow position: | chr25:18060777-18060295 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-503 |
| Cow position: | chr25:34656636-34656139 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 29 |
| Conread position: | 1-526 |
| Cow position: | chr25:18890206-18889685 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 32 |
| Conread position: | 1-526 |
| Cow position: | chr25:22147303-22147825 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-527 |
| Cow position: | chr25:36240356-36240879 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 22 |
| Conread position: | 1-571 |
| Cow position: | chr25:19288538-19287970 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 27 |
| Conread position: | 1-573 |
| Cow position: | chr25:12759785-12759222 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 11 |
| Conread position: | 1-593 |
| Cow position: | chr25:18092828-18093407 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-486 |
| Cow position: | chr25:20777084-20776612 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 28 |
| Conread position: | 5-504 |
| Cow position: | chr25:17589735-17589242 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 28 |
| Conread position: | 5-504 |
| Cow position: | chr25:19916896-19917396 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 28 |
| Conread position: | 5-526 |
| Cow position: | chr25:26279079-26279589 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 28 |
| Conread position: | 5-593 |
| Cow position: | chr25:11933712-11933132 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 531, 25 |
| Conread position: | 7-503 |
| Cow position: | chr25:18276009-18275521 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 24 |
| Conread position: | 8-160 |
| Cow position: | chr25:17563104-17562955 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 8-324 |
| Cow position: | chr25:17560795-17560476 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 23 |
| Conread position: | 18-228 |
| Cow position: | chr25:18302617-18302823 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 21-503 |
| Cow position: | chr25:17468867-17468395 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 9 |
| Conread position: | 46-481 |
| Cow position: | chr25:12942847-12942415 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 96-499 |
| Cow position: | chr25:33665967-33665570 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 117-496 |
| Cow position: | chr25:27022645-27022265 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 224 |
| Conread position: | 225-503 |
| Cow position: | chr25:18303431-18303707 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 230-490 |
| Cow position: | chr25:9544100-9544355 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 591-806 |
| Cow position: | chr25:11933048-11932830 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 112 |
Show alignments to all cow chromosomes.