Cow genome map
| Conread name: | Spl1-SPL01C060046 |
| Conread position: | 1-229 |
| Cow position: | chr26:6850344-6850119 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-245 |
| Cow position: | chr26:3074357-3074594 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 1-291 |
| Cow position: | chr26:11536999-11536719 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-363 |
| Cow position: | chr26:20254900-20255242 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 29 |
| Conread position: | 1-483 |
| Cow position: | chr26:5675000-5675467 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-503 |
| Cow position: | chr26:12574563-12574081 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-526 |
| Cow position: | chr26:17397100-17396580 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 1-526 |
| Cow position: | chr26:19351683-19351163 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 2-196 |
| Cow position: | chr26:23605069-23604878 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 5-483 |
| Cow position: | chr26:9563524-9563050 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-490 |
| Cow position: | chr26:4605348-4604873 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-496 |
| Cow position: | chr26:15144923-15144438 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 28 |
| Conread position: | 5-502 |
| Cow position: | chr26:11254223-11253729 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-502 |
| Cow position: | chr26:12588731-12588238 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 5-528 |
| Cow position: | chr26:18854922-18855447 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 28 |
| Conread position: | 5-541 |
| Cow position: | chr26:2198461-2198996 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 28 |
| Conread position: | 8-486 |
| Cow position: | chr26:3691643-3692102 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 14-501 |
| Cow position: | chr26:12656138-12656598 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 17 |
| Conread position: | 18-477 |
| Cow position: | chr26:30589526-30589070 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 15 |
| Conread position: | 24-202 |
| Cow position: | chr26:12659837-12659661 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 25-240 |
| Cow position: | chr26:9845759-9845547 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 64-505 |
| Cow position: | chr26:9118214-9118649 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 87-486 |
| Cow position: | chr26:3030916-3030518 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 101-504 |
| Cow position: | chr26:30782668-30783076 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 236 |
| Conread position: | 141-489 |
| Cow position: | chr26:8918818-8919164 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 189-581 |
| Cow position: | chr26:12666123-12666508 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 195-806 |
| Cow position: | chr26:9845555-9844974 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 199-613 |
| Cow position: | chr26:9849898-9849483 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 14 |
| Conread position: | 199-613 |
| Cow position: | chr26:9853408-9852994 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 14 |
| Conread position: | 203-567 |
| Cow position: | chr26:8283032-8282670 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 138 |
| Conread position: | 671-806 |
| Cow position: | chr26:12656612-12656747 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.