Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-197
Cow position: chr29:17662698-17662894 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 86

Conread position: 1-323
Cow position: chr29:21427278-21426962 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-329
Cow position: chr29:21246345-21246672 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 1-477
Cow position: chr29:38226770-38227229 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 1-482
Cow position: chr29:7431439-7430965 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position: chr29:45459496-45459970 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 24

Conread position: 1-483
Cow position: chr29:10824182-10823714 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 1-483
Cow position: chr29:19623467-19622992 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr29:19652885-19653363 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 32

Conread position: 1-483
Cow position: chr29:25932767-25932289 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-483
Cow position: chr29:43322336-43322810 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position: chr29:40503202-40502721 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 32

Conread position: 1-496
Cow position: chr29:16769909-16770392 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 30

Conread position: 1-503
Cow position: chr29:2841588-2841098 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 20

Conread position: 1-503
Cow position: chr29:11049061-11049553 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chr29:27040983-27040497 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 27

Conread position: 1-523
Cow position: chr29:32539587-32540105 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-526
Cow position: chr29:2689682-2690198 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 27

Conread position: 1-526
Cow position: chr29:10648468-10647953 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-526
Cow position: chr29:20250936-20251457 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-586
Cow position: chr29:1715028-1715599 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 22

Conread position: 2-503
Cow position: chr29:35196455-35196939 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-161
Cow position: chr29:13578198-13578353 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 28

Conread position: 5-315
Cow position: chr29:31180904-31181212 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-350
Cow position: chr29:28060885-28060541 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 5-428
Cow position: chr29:32315821-32316241 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr29:39079925-39079457 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-486
Cow position: chr29:15895067-15894592 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-489
Cow position: chr29:7840577-7841057 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr29:27250554-27250068 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-504
Cow position: chr29:610830-610332 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 5-526
Cow position: chr29:2099625-2100143 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 5-526
Cow position: chr29:6266713-6266203 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 7-205
Cow position: chr29:31121588-31121784 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 7-482
Cow position: chr29:5957386-5957858 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 24

Conread position: 8-476
Cow position: chr29:10848327-10847844 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 23

Conread position: 8-503
Cow position: chr29:21543582-21543094 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 10-581
Cow position: chr29:104361-104913 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 520, 18

Conread position: 18-489
Cow position: chr29:35296668-35297135 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 15

Conread position: 25-503
Cow position: chr29:43366196-43365727 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 7

Conread position: 28-515
Cow position: chr29:2750591-2750134 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 60

Conread position: 40-505
Cow position: chr29:19884883-19885351 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 48

Conread position: 58-489
Cow position: chr29:27981085-27980658 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 74-249
Cow position: chr29:43791030-43791202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 84-526
Cow position: chr29:14585785-14586220 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 110-573
Cow position: chr29:803468-803007 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 132-489
Cow position: chr29:18857039-18856683 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 141-470
Cow position: chr29:42650199-42650528 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 172

Conread position: 312-586
Cow position: chr29:24709163-24708892 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 104, 36

Conread position: 319-503
Cow position: chr29:21426932-21426755 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 151
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 363-806
Cow position: chr29:14086313-14085880 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 368-701
Cow position: chr29:5983069-5982737 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 250

Conread position: 424-628
Cow position: chr29:8331136-8330939 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 426-586
Cow position: chr29:13648882-13649038 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 74

Conread position: 513-667
Cow position: chr29:2749931-2749782 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 103

Show alignments to all cow chromosomes.