Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 216, 29

Conread position: 1-452
Cow position:
Alignm length: 452
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-457
Cow position:
Alignm length: 461
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 32

Conread position: 1-458
Cow position:
Alignm length: 466
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 32

Conread position: 1-477
Cow position:
Alignm length: 477
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-478
Cow position:
Alignm length: 479
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 27

Conread position: 1-479
Cow position:
Alignm length: 480
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 32

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 29

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-489
Cow position:
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 10

Conread position: 1-500
Cow position:
Alignm length: 500
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-502
Cow position:
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position:
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 29

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 506
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 40

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position:
Alignm length: 506
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 30

Conread position: 1-504
Cow position:
Alignm length: 504
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 527
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 24

Conread position: 1-526
Cow position:
Alignm length: 532
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 29

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-538
Cow position:
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 1-581
Cow position:
Alignm length: 585
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 29

Conread position: 1-693
Cow position:
Alignm length: 696
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 29

Conread position: 1-798
Cow position:
Alignm length: 810
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 1-804
Cow position:
Alignm length: 805
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 670, 30

Conread position: 2-191
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 2-503
Cow position:
Alignm length: 503
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 2-503
Cow position:
Alignm length: 503
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 28

Conread position: 2-538
Cow position:
Alignm length: 541
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 82

Conread position: 2-569
Cow position:
Alignm length: 569
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 11

Conread position: 4-499
Cow position:
Alignm length: 498
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 27

Conread position: 5-159
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 5-310
Cow position:
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-403
Cow position:
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-414
Cow position:
Alignm length: 410
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-429
Cow position:
Alignm length: 425
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-483
Cow position:
Alignm length: 479
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position:
Alignm length: 479
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-503
Cow position:
Alignm length: 499
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 28

Conread position: 5-541
Cow position:
Alignm length: 543
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 28

Conread position: 5-544
Cow position:
Alignm length: 545
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-564
Cow position:
Alignm length: 565
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-593
Cow position:
Alignm length: 590
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 21

Conread position: 6-232
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 6-476
Cow position:
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 6-497
Cow position:
Alignm length: 493
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 27

Conread position: 6-593
Cow position:
Alignm length: 590
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 24

Conread position: 10-311
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 18

Conread position: 10-504
Cow position:
Alignm length: 500
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 23

Conread position: 13-483
Cow position:
Alignm length: 471
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 14-577
Cow position:
Alignm length: 572
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 14

Conread position: 14-716
Cow position:
Alignm length: 707
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 16

Conread position: 15-479
Cow position:
Alignm length: 465
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 17-581
Cow position:
Alignm length: 569
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 84

Conread position: 18-361
Cow position:
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-489
Cow position:
Alignm length: 473
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 70

Conread position: 18-565
Cow position:
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 13

Conread position: 21-205
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 66

Conread position: 21-431
Cow position:
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-523
Cow position:
Alignm length: 505
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 37

Conread position: 23-489
Cow position:
Alignm length: 467
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 23-502
Cow position:
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 23-504
Cow position:
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 23-593
Cow position:
Alignm length: 575
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 25-256
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 62

Conread position: 28-593
Cow position:
Alignm length: 569
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 15

Conread position: 29-504
Cow position:
Alignm length: 484
Alignm identity: 316
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 14

Conread position: 31-483
Cow position:
Alignm length: 453
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 33-483
Cow position:
Alignm length: 451
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 33-719
Cow position:
Alignm length: 695
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 54

Conread position: 34-504
Cow position:
Alignm length: 476
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 23

Conread position: 35-347
Cow position:
Alignm length: 316
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 213

Conread position: 43-337
Cow position:
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 45-254
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 42

Conread position: 46-482
Cow position:
Alignm length: 437
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 65-526
Cow position:
Alignm length: 463
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 21

Conread position: 72-701
Cow position:
Alignm length: 631
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 593, 15

Conread position: 100-619
Cow position:
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 40

Conread position: 101-585
Cow position:
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 111-806
Cow position:
Alignm length: 704
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 141-538
Cow position:
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 141-563
Cow position:
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 47

Conread position: 170-520
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 177

Conread position: 173-503
Cow position:
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 189-613
Cow position:
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 16

Conread position: 311-556
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 37

Conread position: 316-719
Cow position:
Alignm length: 406
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 32

Conread position: 316-803
Cow position:
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 331-663
Cow position:
Alignm length: 333
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 399-544
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 131, 0

Show alignments to all cow chromosomes.