Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 27

Conread position: 1-205
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 1-259
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position:
Alignm length: 493
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-500
Cow position:
Alignm length: 500
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-525
Cow position:
Alignm length: 525
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-526
Cow position:
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 32

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-532
Cow position:
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 527, 32

Conread position: 1-586
Cow position:
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 29

Conread position: 1-674
Cow position:
Alignm length: 682
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 29

Conread position: 1-701
Cow position:
Alignm length: 703
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 30

Conread position: 1-802
Cow position:
Alignm length: 805
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 27

Conread position: 1-806
Cow position:
Alignm length: 809
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 30

Conread position: 5-204
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 5-443
Cow position:
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-472
Cow position:
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position:
Alignm length: 479
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-483
Cow position:
Alignm length: 479
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-483
Cow position:
Alignm length: 481
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 5-502
Cow position:
Alignm length: 499
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position:
Alignm length: 506
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 5-539
Cow position:
Alignm length: 538
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 28

Conread position: 5-541
Cow position:
Alignm length: 556
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 28

Conread position: 6-489
Cow position:
Alignm length: 484
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-541
Cow position:
Alignm length: 540
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 8-569
Cow position:
Alignm length: 590
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 20

Conread position: 13-585
Cow position:
Alignm length: 575
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 523, 18

Conread position: 14-503
Cow position:
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 14-523
Cow position:
Alignm length: 510
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 15-489
Cow position:
Alignm length: 475
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 17-325
Cow position:
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-496
Cow position:
Alignm length: 480
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 15

Conread position: 18-502
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 21-806
Cow position:
Alignm length: 800
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 7

Conread position: 23-182
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 23-693
Cow position:
Alignm length: 675
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 64

Conread position: 28-489
Cow position:
Alignm length: 462
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 28-489
Cow position:
Alignm length: 463
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 5

Conread position: 30-509
Cow position:
Alignm length: 481
Alignm identity: 309
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 141, 53

Conread position: 59-571
Cow position:
Alignm length: 513
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 84-701
Cow position:
Alignm length: 620
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 588, 16

Conread position: 92-483
Cow position:
Alignm length: 394
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 176-503
Cow position:
Alignm length: 328
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 216-526
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 113

Conread position: 273-572
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 75

Conread position: 312-503
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 96, 36

Conread position: 474-701
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 56, 132

Show alignments to all cow chromosomes.