Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-387
Cow position:
Alignm length: 390
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 24

Conread position: 1-470
Cow position:
Alignm length: 470
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-477
Cow position:
Alignm length: 477
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-481
Cow position:
Alignm length: 481
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-499
Cow position:
Alignm length: 501
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 27

Conread position: 1-503
Cow position:
Alignm length: 519
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 29

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 29

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-528
Cow position:
Alignm length: 529
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 1-532
Cow position:
Alignm length: 533
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 527, 32

Conread position: 1-536
Cow position:
Alignm length: 542
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 29

Conread position: 1-587
Cow position:
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-702
Cow position:
Alignm length: 706
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 90

Conread position: 1-759
Cow position:
Alignm length: 774
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 18

Conread position: 2-468
Cow position:
Alignm length: 469
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 3-282
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 4-503
Cow position:
Alignm length: 501
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 26

Conread position: 5-180
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 5-326
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 29

Conread position: 5-332
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-363
Cow position:
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position:
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-483
Cow position:
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 499
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 28

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-503
Cow position:
Alignm length: 502
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 74

Conread position: 5-503
Cow position:
Alignm length: 502
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 23

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position:
Alignm length: 501
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position:
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 28

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-523
Cow position:
Alignm length: 521
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 26

Conread position: 5-526
Cow position:
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-581
Cow position:
Alignm length: 582
Alignm identity: 384
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 219, 23

Conread position: 6-303
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-481
Cow position:
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 6-496
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 24

Conread position: 9-503
Cow position:
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 21

Conread position: 14-248
Cow position:
Alignm length: 235
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 14-583
Cow position:
Alignm length: 575
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 508, 16

Conread position: 18-497
Cow position:
Alignm length: 480
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-541
Cow position:
Alignm length: 529
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 21-500
Cow position:
Alignm length: 485
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 32

Conread position: 21-541
Cow position:
Alignm length: 528
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 12

Conread position: 23-573
Cow position:
Alignm length: 555
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 64

Conread position: 28-504
Cow position:
Alignm length: 487
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 13

Conread position: 31-502
Cow position:
Alignm length: 474
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 56

Conread position: 31-526
Cow position:
Alignm length: 496
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 33-395
Cow position:
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 48-460
Cow position:
Alignm length: 413
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 64-573
Cow position:
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 24

Conread position: 82-419
Cow position:
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 103-409
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 118-585
Cow position:
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 160-503
Cow position:
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 191-485
Cow position:
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 195-593
Cow position:
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 112

Conread position: 225-585
Cow position:
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 46

Conread position: 246-577
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 88, 300

Conread position: 273-503
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 297-496
Cow position:
Alignm length: 200
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 327-612
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 357-593
Cow position:
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 157

Conread position: 357-593
Cow position:
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 157

Conread position: 372-503
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 372-775
Cow position:
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 62

Conread position: 388-573
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 23

Conread position: 474-806
Cow position:
Alignm length: 334
Alignm identity: 234
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 36

Conread position: 534-806
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 9

Conread position: 621-805
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 51, 74

Show alignments to all cow chromosomes.