Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 1-210
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 1-226
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 1-232
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 88

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-274
Cow position:
Alignm length: 274
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 1-321
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-340
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-427
Cow position:
Alignm length: 427
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-470
Cow position:
Alignm length: 470
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-477
Cow position:
Alignm length: 477
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-478
Cow position:
Alignm length: 478
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 24

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 24

Conread position: 1-483
Cow position:
Alignm length: 486
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 88

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position:
Alignm length: 489
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 23

Conread position: 1-503
Cow position:
Alignm length: 503
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position:
Alignm length: 507
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 32

Conread position: 1-524
Cow position:
Alignm length: 525
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 24

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 529
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 32

Conread position: 1-532
Cow position:
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-541
Cow position:
Alignm length: 547
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-750
Cow position:
Alignm length: 753
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 1-799
Cow position:
Alignm length: 815
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 2-483
Cow position:
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 2-537
Cow position:
Alignm length: 537
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 31

Conread position: 5-182
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 5-190
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 5-251
Cow position:
Alignm length: 247
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 5-425
Cow position:
Alignm length: 422
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 28

Conread position: 5-443
Cow position:
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 28

Conread position: 5-483
Cow position:
Alignm length: 504
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 489
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 28

Conread position: 5-496
Cow position:
Alignm length: 499
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 16

Conread position: 5-496
Cow position:
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 28

Conread position: 5-503
Cow position:
Alignm length: 499
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-528
Cow position:
Alignm length: 530
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 542
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position:
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 28

Conread position: 5-541
Cow position:
Alignm length: 553
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 26

Conread position: 5-586
Cow position:
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 23

Conread position: 6-486
Cow position:
Alignm length: 482
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 26

Conread position: 6-525
Cow position:
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 24

Conread position: 7-483
Cow position:
Alignm length: 477
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 14-489
Cow position:
Alignm length: 478
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 15-532
Cow position:
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 18

Conread position: 18-504
Cow position:
Alignm length: 491
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 15

Conread position: 19-593
Cow position:
Alignm length: 576
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 515, 11

Conread position: 21-452
Cow position:
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 67

Conread position: 21-485
Cow position:
Alignm length: 465
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-532
Cow position:
Alignm length: 520
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 10

Conread position: 23-489
Cow position:
Alignm length: 468
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 23-503
Cow position:
Alignm length: 493
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 64

Conread position: 28-263
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 30

Conread position: 28-393
Cow position:
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 40

Conread position: 28-561
Cow position:
Alignm length: 537
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 58

Conread position: 33-470
Cow position:
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 64-483
Cow position:
Alignm length: 421
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 22

Conread position: 113-568
Cow position:
Alignm length: 458
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 237

Conread position: 116-593
Cow position:
Alignm length: 479
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 8

Conread position: 118-480
Cow position:
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 225-571
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 203

Conread position: 225-806
Cow position:
Alignm length: 589
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 82

Conread position: 344-614
Cow position:
Alignm length: 272
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 57

Conread position: 346-807
Cow position:
Alignm length: 465
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 134

Conread position: 360-586
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 45

Conread position: 377-646
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 53

Conread position: 536-806
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 60

Conread position: 591-759
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.