Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 1-204
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 184, 32

Conread position: 1-221
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 1-316
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 1-395
Cow position:
Alignm length: 395
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-429
Cow position:
Alignm length: 429
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-429
Cow position:
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-453
Cow position:
Alignm length: 456
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 32

Conread position: 1-461
Cow position:
Alignm length: 463
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 24

Conread position: 1-470
Cow position:
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 32

Conread position: 1-470
Cow position:
Alignm length: 472
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 1-470
Cow position:
Alignm length: 476
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 29

Conread position: 1-476
Cow position:
Alignm length: 476
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position:
Alignm length: 483
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 32

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 32

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-496
Cow position:
Alignm length: 504
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 1-500
Cow position:
Alignm length: 501
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-503
Cow position:
Alignm length: 506
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 34

Conread position: 1-503
Cow position:
Alignm length: 506
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 1-503
Cow position:
Alignm length: 508
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 27

Conread position: 1-503
Cow position:
Alignm length: 507
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 30

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position:
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-572
Cow position:
Alignm length: 578
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 29

Conread position: 1-582
Cow position:
Alignm length: 600
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 27

Conread position: 1-806
Cow position:
Alignm length: 813
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 29

Conread position: 1-806
Cow position:
Alignm length: 825
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 29

Conread position: 2-483
Cow position:
Alignm length: 482
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-483
Cow position:
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 2-483
Cow position:
Alignm length: 482
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-504
Cow position:
Alignm length: 518
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 31

Conread position: 3-804
Cow position:
Alignm length: 804
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 668, 27

Conread position: 5-162
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 5-219
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-223
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 5-249
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position:
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position:
Alignm length: 499
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 28

Conread position: 5-502
Cow position:
Alignm length: 498
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-504
Cow position:
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-585
Cow position:
Alignm length: 582
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 526, 28

Conread position: 6-468
Cow position:
Alignm length: 464
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 6-806
Cow position:
Alignm length: 816
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 81

Conread position: 14-574
Cow position:
Alignm length: 574
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 18-449
Cow position:
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-502
Cow position:
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-503
Cow position:
Alignm length: 486
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-489
Cow position:
Alignm length: 470
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 67

Conread position: 21-774
Cow position:
Alignm length: 767
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 7

Conread position: 28-587
Cow position:
Alignm length: 564
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 7

Conread position: 33-503
Cow position:
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 43-314
Cow position:
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 44

Conread position: 44-489
Cow position:
Alignm length: 446
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 48-802
Cow position:
Alignm length: 759
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 43

Conread position: 49-463
Cow position:
Alignm length: 415
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 51-197
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 59-502
Cow position:
Alignm length: 453
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 28

Conread position: 59-806
Cow position:
Alignm length: 753
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 19

Conread position: 70-779
Cow position:
Alignm length: 726
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 16

Conread position: 84-503
Cow position:
Alignm length: 420
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 115-585
Cow position:
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 55

Conread position: 132-498
Cow position:
Alignm length: 368
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 162

Conread position: 132-541
Cow position:
Alignm length: 415
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 208

Conread position: 173-593
Cow position:
Alignm length: 424
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 175

Conread position: 195-593
Cow position:
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 312-806
Cow position:
Alignm length: 518
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 36

Conread position: 332-503
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 343-593
Cow position:
Alignm length: 251
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 349-806
Cow position:
Alignm length: 459
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 89

Conread position: 357-806
Cow position:
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 137

Conread position: 545-689
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 126, 0

Show alignments to all cow chromosomes.