Cow genome map
| Conread name: | Spl1-SPL01C060046 |
| Conread position: | 1-159 |
| Cow position: | chr8:60060217-60060372 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-192 |
| Cow position: | chr8:44121895-44122080 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-204 |
| Cow position: | chr8:29440814-29440612 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 184, 32 |
| Conread position: | 1-221 |
| Cow position: | chr8:45795731-45795513 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-316 |
| Cow position: | chr8:44077004-44076718 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-395 |
| Cow position: | chr8:53427341-53427724 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-429 |
| Cow position: | chr8:25407461-25407882 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-429 |
| Cow position: | chr8:36637644-36637221 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-453 |
| Cow position: | chr8:11801248-11801695 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 32 |
| Conread position: | 1-461 |
| Cow position: | chr8:8910239-8910690 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 24 |
| Conread position: | 1-470 |
| Cow position: | chr8:25522411-25522879 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 32 |
| Conread position: | 1-470 |
| Cow position: | chr8:27983785-27983319 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-470 |
| Cow position: | chr8:47885039-47885507 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 29 |
| Conread position: | 1-476 |
| Cow position: | chr8:3857001-3856532 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-482 |
| Cow position: | chr8:39196203-39195727 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 32 |
| Conread position: | 1-483 |
| Cow position: | chr8:10743613-10743139 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-483 |
| Cow position: | chr8:44244562-44244082 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 32 |
| Conread position: | 1-483 |
| Cow position: | chr8:47662313-47661834 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-483 |
| Cow position: | chr8:50993801-50994279 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-483 |
| Cow position: | chr8:59262881-59262402 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-496 |
| Cow position: | chr8:11821329-11821817 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 1-500 |
| Cow position: | chr8:45189106-45189592 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 1-503 |
| Cow position: | chr8:19050500-19050989 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 432, 34 |
| Conread position: | 1-503 |
| Cow position: | chr8:32930523-32931021 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 1-503 |
| Cow position: | chr8:44036763-44036267 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 27 |
| Conread position: | 1-503 |
| Cow position: | chr8:45317110-45316614 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 30 |
| Conread position: | 1-526 |
| Cow position: | chr8:3784723-3785244 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-526 |
| Cow position: | chr8:5016195-5016715 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-526 |
| Cow position: | chr8:36636529-36636010 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-526 |
| Cow position: | chr8:38390380-38390902 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-526 |
| Cow position: | chr8:42483940-42484446 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-572 |
| Cow position: | chr8:11055888-11056448 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 29 |
| Conread position: | 1-582 |
| Cow position: | chr8:45448465-45449053 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 27 |
| Conread position: | 1-806 |
| Cow position: | chr8:44693308-44694086 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 29 |
| Conread position: | 1-806 |
| Cow position: | chr8:61035352-61034538 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 605 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 29 |
| Conread position: | 2-483 |
| Cow position: | chr8:2171365-2170888 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-483 |
| Cow position: | chr8:8229770-8229290 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 2-483 |
| Cow position: | chr8:33588392-33588865 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-504 |
| Cow position: | chr8:2885758-2886267 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 31 |
| Conread position: | 3-804 |
| Cow position: | chr8:11970546-11969791 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 668, 27 |
| Conread position: | 5-162 |
| Cow position: | chr8:26006750-26006595 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-219 |
| Cow position: | chr8:36292187-36292397 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-223 |
| Cow position: | chr8:46945107-46944897 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 5-249 |
| Cow position: | chr8:12505014-12505253 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-489 |
| Cow position: | chr8:1154291-1153810 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-489 |
| Cow position: | chr8:27578424-27578899 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-489 |
| Cow position: | chr8:32632006-32631530 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-489 |
| Cow position: | chr8:47069790-47069308 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-502 |
| Cow position: | chr8:8656199-8655708 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 28 |
| Conread position: | 5-502 |
| Cow position: | chr8:47074286-47074778 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-504 |
| Cow position: | chr8:22572278-22571779 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 28 |
| Conread position: | 5-585 |
| Cow position: | chr8:23766370-23765813 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 526, 28 |
| Conread position: | 6-468 |
| Cow position: | chr8:14928975-14928517 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 6-806 |
| Cow position: | chr8:24420509-24419716 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 624 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 14-574 |
| Cow position: | chr8:13808625-13809184 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 18-449 |
| Cow position: | chr8:46091832-46091412 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 18-502 |
| Cow position: | chr8:9275049-9275521 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 18-503 |
| Cow position: | chr8:25776635-25776162 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 21-489 |
| Cow position: | chr8:10748407-10748872 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 21-774 |
| Cow position: | chr8:45161332-45160597 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 7 |
| Conread position: | 28-587 |
| Cow position: | chr8:45693586-45693030 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 7 |
| Conread position: | 33-503 |
| Cow position: | chr8:23216785-23217271 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 43-314 |
| Cow position: | chr8:29581995-29582268 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 44 |
| Conread position: | 44-489 |
| Cow position: | chr8:8557093-8556651 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 48-802 |
| Cow position: | chr8:42161662-42160937 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 43 |
| Conread position: | 49-463 |
| Cow position: | chr8:61067180-61066775 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 51-197 |
| Cow position: | chr8:42759025-42759170 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 59-502 |
| Cow position: | chr8:1349175-1348725 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 28 |
| Conread position: | 59-806 |
| Cow position: | chr8:38607448-38606716 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 19 |
| Conread position: | 70-779 |
| Cow position: | chr8:33430016-33430710 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 16 |
| Conread position: | 84-503 |
| Cow position: | chr8:27925420-27925826 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 115-585 |
| Cow position: | chr8:47491697-47491237 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 55 |
| Conread position: | 132-498 |
| Cow position: | chr8:21158676-21158312 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 162 |
| Conread position: | 132-541 |
| Cow position: | chr8:6065627-6065215 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 208 |
| Conread position: | 173-593 |
| Cow position: | chr8:25542684-25543103 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 175 |
| Conread position: | 195-593 |
| Cow position: | chr8:12543832-12543453 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 312-806 |
| Cow position: | chr8:16083649-16084161 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 36 |
| Conread position: | 332-503 |
| Cow position: | chr8:46600635-46600805 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 343-593 |
| Cow position: | chr8:47672822-47673072 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 349-806 |
| Cow position: | chr8:58187142-58186717 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 89 |
| Conread position: | 357-806 |
| Cow position: | chr8:44076522-44076085 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 137 |
| Conread position: | 545-689 |
| Cow position: | chr8:1117448-1117593 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
Show alignments to all cow chromosomes.