Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-207
Cow position: chrX:5834594-5834396 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 1-293
Cow position: chrX:6276020-6275733 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-347
Cow position: chrX:22131123-22130792 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 279, 27

Conread position: 1-407
Cow position: chrX:11668865-11668469 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 30

Conread position: 1-465
Cow position: chrX:29853993-29853535 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-475
Cow position: chrX:13413545-13413075 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:2483069-2482589 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 1-483
Cow position: chrX:21222498-21222977 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:22487759-22488230 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:23392031-23391550 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 32

Conread position: 1-483
Cow position: chrX:26527546-26528025 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:26759020-26758556 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-486
Cow position: chrX:27990210-27989729 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 33

Conread position: 1-496
Cow position: chrX:26504761-26505247 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 27

Conread position: 1-497
Cow position: chrX:40057491-40057001 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 24

Conread position: 1-501
Cow position: chrX:22777886-22778380 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 23

Conread position: 1-502
Cow position: chrX:16363552-16363056 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chrX:320041-320536 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chrX:970336-970836 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chrX:6909764-6909277 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 27

Conread position: 1-503
Cow position: chrX:13007063-13006556 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 29

Conread position: 1-503
Cow position: chrX:21289917-21289422 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chrX:21602459-21602948 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chrX:21633013-21632518 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chrX:24122347-24121851 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 29

Conread position: 1-503
Cow position: chrX:27494275-27494779 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 1-503
Cow position: chrX:35017387-35017878 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 27

Conread position: 1-504
Cow position: chrX:28634842-28634342 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 20

Conread position: 1-522
Cow position: chrX:1546505-1547025 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 32

Conread position: 1-522
Cow position: chrX:15598500-15599020 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-523
Cow position: chrX:29872986-29872475 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 24

Conread position: 1-526
Cow position: chrX:16698872-16699392 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 32

Conread position: 1-526
Cow position: chrX:18954944-18954433 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chrX:30184323-30183802 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 32

Conread position: 1-526
Cow position: chrX:30710924-30711441 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 32

Conread position: 1-585
Cow position: chrX:20698706-20698148 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 92

Conread position: 1-595
Cow position: chrX:17668713-17668142 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 24

Conread position: 1-673
Cow position: chrX:30142819-30142167 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 29

Conread position: 2-232
Cow position: chrX:30056243-30056466 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 2-316
Cow position: chrX:4795489-4795810 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 190, 28

Conread position: 2-503
Cow position: chrX:20803709-20804196 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 28

Conread position: 2-693
Cow position: chrX:16017552-16016865 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 26

Conread position: 5-254
Cow position: chrX:24325571-24325323 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 225, 28

Conread position: 5-365
Cow position: chrX:30666364-30666008 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-377
Cow position: chrX:8479279-8479644 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-413
Cow position: chrX:12289367-12288957 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 28

Conread position: 5-459
Cow position: chrX:2860224-2859776 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 5-459
Cow position: chrX:5395388-5394937 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 28

Conread position: 5-481
Cow position: chrX:26400893-26400421 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 5-483
Cow position: chrX:23455996-23455529 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-484
Cow position: chrX:15127668-15127192 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 5-485
Cow position: chrX:7481181-7481654 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 5-485
Cow position: chrX:26767618-26767147 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 5-486
Cow position: chrX:12804285-12803812 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-486
Cow position: chrX:20316481-20316003 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chrX:2563283-2562802 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chrX:12280681-12280215 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-489
Cow position: chrX:12655179-12654705 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-489
Cow position: chrX:13398539-13398065 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-489
Cow position: chrX:27426742-27426265 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-489
Cow position: chrX:28562636-28562159 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-497
Cow position: chrX:3085327-3084836 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 5-502
Cow position: chrX:8454330-8454820 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chrX:9193070-9192576 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chrX:17478948-17478454 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 37

Conread position: 5-502
Cow position: chrX:23046720-23047212 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 5-502
Cow position: chrX:39521481-39521975 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-504
Cow position: chrX:2603623-2604122 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-523
Cow position: chrX:8586668-8587187 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 25

Conread position: 5-540
Cow position: chrX:24088977-24089511 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chrX:7093176-7093709 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 16

Conread position: 5-541
Cow position: chrX:7751473-7752011 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 28

Conread position: 5-541
Cow position: chrX:10531984-10531447 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 5-541
Cow position: chrX:11465424-11464891 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position: chrX:14787298-14786761 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chrX:16275254-16275788 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position: chrX:18218971-18219508 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chrX:31187659-31187135 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 5-541
Cow position: chrX:35529435-35529973 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 26

Conread position: 5-563
Cow position: chrX:24136820-24136269 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 26

Conread position: 5-593
Cow position: chrX:18532580-18533148 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 23

Conread position: 5-806
Cow position: chrX:6283506-6282707 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 20

Conread position: 6-497
Cow position: chrX:6873494-6873010 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-489
Cow position: chrX:9007918-9008393 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 8-490
Cow position: chrX:22813964-22814438 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 13-489
Cow position: chrX:37848597-37849069 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 14-502
Cow position: chrX:18660198-18659715 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 14-526
Cow position: chrX:23041532-23041031 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 18-432
Cow position: chrX:21489818-21490227 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-502
Cow position: chrX:5284147-5283667 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-502
Cow position: chrX:8670180-8670659 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-503
Cow position: chrX:29285022-29285485 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 18-523
Cow position: chrX:24484823-24484324 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-540
Cow position: chrX:5839925-5840438 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 18-541
Cow position: chrX:2101446-2101970 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 15

Conread position: 18-564
Cow position: chrX:22526017-22525471 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 21-254
Cow position: chrX:39717385-39717619 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 66

Conread position: 21-501
Cow position: chrX:9124949-9125426 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 12

Conread position: 23-190
Cow position: chrX:25332680-25332846 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 25-585
Cow position: chrX:2142887-2143432 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 68

Conread position: 26-612
Cow position: chrX:30369408-30368838 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 61

Conread position: 28-502
Cow position: chrX:21304943-21304458 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 59

Conread position: 29-806
Cow position: chrX:2537174-2536418 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 642, 57

Conread position: 31-564
Cow position: chrX:29950975-29950451 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 43-502
Cow position: chrX:41411409-41410953 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 45-504
Cow position: chrX:37811774-37812236 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 295

Conread position: 70-541
Cow position: chrX:29947342-29947818 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 272

Conread position: 72-497
Cow position: chrX:22583059-22582636 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 10

Conread position: 84-503
Cow position: chrX:28603804-28603390 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 87-503
Cow position: chrX:12670206-12669795 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 132-593
Cow position: chrX:12973532-12973072 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 308

Conread position: 136-624
Cow position: chrX:44386176-44386660 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 17

Conread position: 141-370
Cow position: chrX:21586875-21587101 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 141-503
Cow position: chrX:26628324-26627963 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 142-586
Cow position: chrX:31192093-31191661 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 99

Conread position: 161-496
Cow position: chrX:16461405-16461733 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 187

Conread position: 220-574
Cow position: chrX:29930961-29930626 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 27

Conread position: 225-593
Cow position: chrX:28549653-28550024 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 95

Conread position: 228-693
Cow position: chrX:31724821-31725287 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 120

Conread position: 258-503
Cow position: chrX:30044320-30044076 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 284-618
Cow position: chrX:35021115-35021448 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 298-587
Cow position: chrX:13052497-13052779 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 235, 50

Conread position: 312-503
Cow position: chrX:37142711-37142521 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 319-503
Cow position: chrX:6275732-6275548 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 29

Conread position: 353-523
Cow position: chrX:41851480-41851310 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 356-503
Cow position: chrX:4795811-4795960 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 359-503
Cow position: chrX:30990016-30990162 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 361-564
Cow position: chrX:29884907-29885117 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 171

Conread position: 363-808
Cow position: chrX:21587120-21587571 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 287

Conread position: 394-553
Cow position: chrX:31081462-31081619 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 107, 7

Conread position: 558-704
Cow position: chrX:27959860-27960007 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 0

Show alignments to all cow chromosomes.